Pairwise Alignments

Query, 454 a.a., flagellum-specific ATP synthase FliI from Rahnella sp. WP5

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella loihica PV-4

 Score =  504 bits (1297), Expect = e-147
 Identities = 274/451 (60%), Positives = 330/451 (73%), Gaps = 11/451 (2%)

Query: 1   MTARLSRLLKTLDDAEKRMARTPSVRRYGRLTRATGLVLEATGLQLPLGATCLIERHDGP 60
           M  R +RLL  L    + +A        G+L R  GL LEATG + P+G+ C I    G 
Sbjct: 1   MKTRQNRLLDKLRQHTQAVAPFMP-EASGQLVRVVGLTLEATGCKAPVGSLCSIATMAGD 59

Query: 61  VVQEVESEVVGFNGQSLFLMPLEEVEGILPGARVYARIAADGQTAGKQLPLGTQLLGRVL 120
           ++    +EV+GF+ + L+LMP+EE+ G++PGA+V       G+  G  L +G  LLGRVL
Sbjct: 60  LI----AEVIGFDDKLLYLMPIEELSGVMPGAKVTPL----GEQTG--LNVGMGLLGRVL 109

Query: 121 DGSAKPLDGLPPPDTGYRAALITPPFNPLQRTPITDVLDVGVRAINALLTVGRGQRMGLF 180
           DG+  P+DGL    T  +A       NPL R  I++ LDVGVRAINA+LTVG+GQRMGLF
Sbjct: 110 DGNGAPIDGLGQLHTDQKATRHATMLNPLARRAISEPLDVGVRAINAMLTVGKGQRMGLF 169

Query: 181 AGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGDEGRARSVVIAAPADV 240
           AGSGVGKSVLLGMM R T ADVIVVGL+GERGREVK+FIE ILG EGR+RSVV+AAPAD 
Sbjct: 170 AGSGVGKSVLLGMMTRGTTADVIVVGLVGERGREVKEFIEEILGAEGRSRSVVVAAPADT 229

Query: 241 SPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 300
           SPL+R++    +TRIAE FRD G +VLL+MDSLTRYA AQREIALA+GEPPATKGYPPSV
Sbjct: 230 SPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSV 289

Query: 301 FAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESG 360
           FAKLP LVERAGNG +G GSITAFYTVLTEGDD QDPIAD+ARAILDGH+VLSR LA+SG
Sbjct: 290 FAKLPKLVERAGNGGAGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSG 349

Query: 361 HYPAIDIEASISRAMTSLIDDAQYGRVRNFKQLLSSYQRNRDLISVGAYAAGSDPMLDRA 420
           HYPAID+EASISR    +I DA     R  KQ+ S YQ+NRDLIS+GAY  GSDP +D A
Sbjct: 350 HYPAIDVEASISRVAPMVISDAHLEATRRVKQMYSLYQQNRDLISIGAYTQGSDPRIDNA 409

Query: 421 IKLYPQMENFLQQDIMERSTYEDACLELNML 451
           I+L P M  FL+Q + E  +++ + L L  L
Sbjct: 410 IRLQPAMNAFLRQTMKEAISFDSSALMLGQL 440