Pairwise Alignments

Query, 340 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

Subject, 672 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein from Marinobacter adhaerens HP15

 Score =  296 bits (758), Expect = 1e-84
 Identities = 161/314 (51%), Positives = 208/314 (66%), Gaps = 4/314 (1%)

Query: 11  LLHINDLRVQFSGSPATV--LDGISLQLEAGKTLALVGESGCGKSVTSLALMGLLPASAK 68
           +L I DL V      +T+  + GISL+L  G+TL +VGESG GKS+T+LALM LLP +AK
Sbjct: 6   ILDIQDLSVDIPTDSSTLHAVRGISLELNRGETLGIVGESGSGKSMTALALMNLLPPAAK 65

Query: 69  VLQGDIRLNDTSLLGLSERQYAD-LRGQELAMIFQEPMTSLNPALTLGDQLAEAVMRHQG 127
                I  + + L   +ER+ A  +RGQ + MIFQEPMTSLNP  ++G QL E +  H+ 
Sbjct: 66  RQASCIDFDGSDLTHATERELASKIRGQRIGMIFQEPMTSLNPVYSIGRQLKETMTLHRK 125

Query: 128 VGKKPAREQALEILKKVQIPAPELRMEAYPHQLSGGMRQRVMIAMALINRPQLLIADEPT 187
           V    A  +A+ +L+KV +P P  R++ YPH+LSGG RQRVMIAMAL+N P+LLIADEPT
Sbjct: 126 VSDTEAENRAVYLLEKVGLPDPASRLKQYPHELSGGQRQRVMIAMALMNEPELLIADEPT 185

Query: 188 TALDVTIQAQILALLNRIQQETGSALLLITHDLGVVAEVADSVAVMYAGQIVEQGLVTDI 247
           TALDVTIQAQIL LL  +QQE G +++LITHDLGVV+  AD++AVMYAG IVE G   ++
Sbjct: 186 TALDVTIQAQILHLLRELQQEFGMSMILITHDLGVVSRAADNIAVMYAGDIVETGKTGEV 245

Query: 248 FNNPQHPYTIGLMGSMPSL-APRQGALSTIPGAVPLPKDMPQGCRFSTRCPFATERCHQE 306
             NP+HPYT GL+  +P      Q  L  IPG VP       GC F++RCP A   C   
Sbjct: 246 LENPRHPYTKGLLECVPGYKGQSQQRLGAIPGIVPAMTGDISGCAFASRCPRAAGVCRTT 305

Query: 307 RPPLRALNQSPHHV 320
            PP + L+Q  + V
Sbjct: 306 NPPTKKLHQGRYFV 319



 Score =  205 bits (521), Expect = 3e-57
 Identities = 116/285 (40%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 25  PATVLDGISLQLEAGKTLALVGESGCGKSVTSLALMGLLPASAKVLQGDIRLNDTSLLGL 84
           P   LD +SL L+ G+ LALVGESGCGK+  +  +MGL   S     G + LN   +  L
Sbjct: 374 PLQALDDVSLTLKKGEVLALVGESGCGKTTLTRTIMGLQAPST----GSVTLNGQRIENL 429

Query: 85  SERQYADLRGQELAMIFQEPMTSLNPALTLGDQLAEAVMRHQGVGKKPAREQALEILKKV 144
                   R + +  IFQ+P +SLNP  T+G+ +A+ +  H G+G    + Q +  + ++
Sbjct: 430 PPMD----RARMIQPIFQDPYSSLNPRKTIGEIIAKPLFVH-GIGSNQEQHQQVRKMMEL 484

Query: 145 QIPAPELRMEAYPHQLSGGMRQRVMIAMALINRPQLLIADEPTTALDVTIQAQILALLNR 204
            +  P     +YP QLSGG RQR  I  ALI  P+++I DEPT+ALDV++QAQIL LL  
Sbjct: 485 -VGLPSRVFNSYPDQLSGGQRQRAAIGRALILNPEVVICDEPTSALDVSVQAQILNLLLD 543

Query: 205 IQQETGSALLLITHDLGVVAEVADSVAVMYAGQIVEQGLVTDIFNNPQHPYTIGLMGSMP 264
           ++ E     L +TH+L VV  +AD VAVMY G+IVE G    + ++P+HPYT  LM S  
Sbjct: 544 LRDELDLTYLFVTHNLSVVQHMADRVAVMYLGEIVECGERDQVMSDPKHPYTHALMNSAL 603

Query: 265 SLAPRQGALST-IPGAVPLPKDMPQGCRFSTRCPFATERCHQERP 308
           S++P +      + G  P P + P GC F  RCP A ++C ++ P
Sbjct: 604 SISPGESVPDPGLSGDFPNPMNRPSGCPFHPRCPLADQQCREQAP 648