Pairwise Alignments

Query, 694 a.a., EAL domain-containing protein from Rahnella sp. WP5

Subject, 852 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  376 bits (965), Expect = e-108
 Identities = 200/444 (45%), Positives = 279/444 (62%), Gaps = 7/444 (1%)

Query: 245 HDPQTSYVMMIADDVTDQQAAHARIHHMAHHDNLTSLPNRILFSQRLSEALQRD--SYTH 302
           HD +       A DVT++  A AR+ +++ HD LT LPNR     RL + L+++  S   
Sbjct: 403 HDGKLVGYRGTASDVTEETKAQARVQYLSQHDPLTGLPNR----SRLRDYLEQNLASLRS 458

Query: 303 SHTATLC-LDLDNFKNVNDALGHQVGDELLRAIAKRLRMTLRDDDTLARIGGDEFAVVLP 361
             T TL  +DLD FK VND LGH  GDE+L  +A RLR   RD D +AR+GGDEF V L 
Sbjct: 459 GSTMTLLYIDLDRFKPVNDTLGHAAGDEVLMGVASRLRERTRDGDLVARLGGDEFVVALH 518

Query: 362 GLKDISAAHQISKRLIESVRPPVIIDGHSLSVGLSIGIALAGSTENTPDQLLRCADMALY 421
            + +     ++  R+IE++  P   + H +S+G SIG+ALA       ++LLRCAD+ALY
Sbjct: 519 RMSEDEDIDRLCNRIIEALSSPFAYENHQISIGASIGVALAPMDATQANELLRCADIALY 578

Query: 422 EAKRNGRNRYEDFRLEMDAAARKRRVVEMDLRDAITCNQLRLYYQPITDARHDAVMGYEA 481
           +AK  GR  +  +  +MD    +R   E  LR AI    L ++YQP   ++   ++G EA
Sbjct: 579 QAKDAGRGTWRAYGRDMDQRLHERLRREEQLRVAIAEQHLEVHYQPRYLSQGMRIIGAEA 638

Query: 482 LMRWHHPENGLIMPVDFIPIAEETGLIHSLGSFALHEACREAASWKGSQTVAVNLSPIQF 541
           L+RWHHP +GL++P  FIP+AEETGLI  LG + L +AC++AA+W     V+VNLSP+Q 
Sbjct: 639 LVRWHHPTHGLLLPEQFIPLAEETGLIIPLGRWVLQQACQQAATWPVDMVVSVNLSPLQL 698

Query: 542 KNSGLLSVVESALEASGLDPSRLEVEITESVLLDNTLGNISTLRKLKSLGVRIALDDFGT 601
            +  LL  +  AL  +GL   RLE+EITES LL  T   +  L+++K+LGV +A+DDFGT
Sbjct: 699 HDDRLLDEISQALHENGLAGERLELEITESALLQETQSTLDLLKRIKALGVHLAVDDFGT 758

Query: 602 GYSSLSYLRSFPFDKIKIDRSFINDMHDSREALAIIRAITGMSRSLDIQTTAEGVETDEQ 661
           GYSSL+ LR +PFD IKID SF+  +  S E  +I+RA+  + R L ++ TAEGVET+EQ
Sbjct: 759 GYSSLTSLRHYPFDVIKIDNSFVAGIEQSMEDHSIVRALIELGRGLQMRVTAEGVETEEQ 818

Query: 662 FRRLKEEGCTLFQGYFFGRPQPSE 685
            R L ++GCT  QG+    P P+E
Sbjct: 819 LRLLTDDGCTEVQGFHMSLPMPAE 842