Pairwise Alignments

Query, 420 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 406 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

 Score =  452 bits (1164), Expect = e-132
 Identities = 212/382 (55%), Positives = 281/382 (73%), Gaps = 3/382 (0%)

Query: 38  WAAGSDAPEKKEIRVGFIPLTDCSSVVMAAVKKFDEKYGIKIIPSKESSWASVRDKLVSG 97
           W AGSDAPEK  + +GF+PLTD +S+++AA + F + +G+ +   ++SSW+++RDKLV G
Sbjct: 15  WVAGSDAPEKSSVNLGFLPLTDAASLIVAATQGFAQPFGLTLNLQRQSSWSALRDKLVGG 74

Query: 98  ELDAAHVLYGLVYGLQLGVSG-PQHDMAMLMSLNNNGQAITLSNQLKQAGVTDAASLKKM 156
           ELDAAH LYGL+Y + LG+ G P  DMA+LM L  NGQ+I+LS  LK AGVT+  +L+  
Sbjct: 75  ELDAAHGLYGLIYAVHLGIGGSPAVDMAVLMGLAQNGQSISLSASLKAAGVTNPEALRNG 134

Query: 157 VDASAKGTYTFAQTFPTGTHAMWLYYWLANAGIHPFNDVRNVVVPPPQMVVNMKIGNMSG 216
           V  S     T A TFPTGTHA+WLYYWLA  GIHP  DVR +V+PP QMV N++ G + G
Sbjct: 135 VRQSG-ARLTLAHTFPTGTHALWLYYWLAANGIHPLQDVRTLVLPPSQMVANLRAGRIDG 193

Query: 217 YCVGEPWNQRAIQDDIGFTAATSQEIWPDHPEKILGTTSAWVAANPNAARALTAAVLDAS 276
           +C GEPW  +AI + +GFT ATSQ IWPDHPEK+LG T  +V   PN ARAL  A+L+AS
Sbjct: 194 FCAGEPWGAQAIAEGVGFTLATSQSIWPDHPEKVLGCTRTFVEQYPNTARALVMAILEAS 253

Query: 277 RWIDTSDANRIETAQVVAARAYINTPVATIQGRMLGDYENGLGKKWKDAHSMRFFNDGAV 336
           R+ID S  NR  TAQ++A R Y++ P+A I+ R LG Y++GLG  W D H +RFF DGA 
Sbjct: 254 RFIDQSLENRRSTAQLIAGREYVDAPLAAIESRFLGAYDDGLGNAWTDMHPLRFFADGAA 313

Query: 337 NYPYLSDGMWFLTQHKRWGLLDKDPDYLAVAKKINRIDVYKQAATAVGGINLPSGDMRSS 396
           N PYLSDG+WF+TQ +RWGLL +DP+YL +A+++ + D+Y+QAA A+ G+ +P   +RS+
Sbjct: 314 NMPYLSDGLWFMTQLRRWGLLRQDPNYLEIAQQVQQADLYRQAAEAL-GMPVPQSPLRSA 372

Query: 397 TLMDGKVWDGSNPAEYANSFAM 418
           TLMDG  WDGS+PA YA SFA+
Sbjct: 373 TLMDGTTWDGSDPAAYARSFAL 394