Pairwise Alignments

Query, 420 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 473 a.a., nitrate transporter component, NrtA from Marinobacter adhaerens HP15

 Score =  212 bits (540), Expect = 2e-59
 Identities = 128/375 (34%), Positives = 195/375 (52%), Gaps = 19/375 (5%)

Query: 46  EKKEIRVGFIPLTDCSSVVMAAVKKFDEKYGIKIIPSKESSWASVRDKLVSGELDAAHVL 105
           EK ++ VGF+P+T  + ++MA    F E+YG+ +  +K + WA  RDK ++GE DA+H+L
Sbjct: 117 EKTKLNVGFVPITCATPIIMAHPMGFYERYGLDVTVTKTAGWAVARDKSLAGEYDASHML 176

Query: 106 YGLVYGLQLGVSGPQHDMAMLMSLNNNGQAITLSNQLKQAGVTDAASLKKMVDASAKGTY 165
             +   + +G         M    N NGQAI L    K           K      KG +
Sbjct: 177 TPMPLAMTMGAGSTPEPFIMPAVENINGQAIVLHVDHKD----------KRDPKQWKG-F 225

Query: 166 TFAQTFPTGTHAMWLYYWLANAGIHPFNDVRNVVVPPPQMVVNMKIGNMSGYCVGEPWNQ 225
            F   F    H   L Y+LA  GI P  DV+  VVPPP+MV N++ GN+ GY   +P+NQ
Sbjct: 226 KFGVPFEYSMHNFLLRYYLAENGIDPDKDVQIRVVPPPEMVANLRAGNLDGYLSPDPFNQ 285

Query: 226 RAIQDDIGFTAATSQEIWPDHPEKILGTTSAWVAANPNAARALTAAVLDASRWIDTSDAN 285
           RA+ + +GF    +++IW  HP      +  +   NPN   AL  A++DA+++ +  D N
Sbjct: 286 RAVWEKVGFIHMLTKDIWEGHPCCAFACSKQFATQNPNTYGALLRAIIDATQYSNNPD-N 344

Query: 286 RIETAQVVAARAYINTPVATIQGRMLGDYENGLGKKWKDAHSMRFFNDGAVNYPYLSDGM 345
           R E ++ +A + Y+N PV  IQ  + G Y +GLG+  KD      F+     +P+ S G+
Sbjct: 345 RKEISEAIAPKNYLNQPVPVIQQVLTGYYADGLGEV-KDVPDRIDFDP----FPWHSMGV 399

Query: 346 WFLTQHKRWGLLDKDPDYLAVAKKINRIDVYKQAATAVGGINLPSGDMRSSTLMDGKVWD 405
           W LTQ KRWG ++ D DY  +A+++       +    + G   P    ++ T+M GK +D
Sbjct: 400 WILTQMKRWGYIEGDVDYKGIAEQVYLASETGKIMEEL-GYTAPDKTYKTHTIM-GKTFD 457

Query: 406 GSNPAEYANSFAMKR 420
                EYA SF + R
Sbjct: 458 SDRAEEYARSFDIGR 472