Pairwise Alignments

Query, 884 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 847 a.a., Outer membrane usher protein FimD from Enterobacter sp. TBS_079

 Score =  621 bits (1602), Expect = 0.0
 Identities = 340/871 (39%), Positives = 521/871 (59%), Gaps = 49/871 (5%)

Query: 34  RSFLLKPLSFFILLSLPGLAFSAET------FNPEMLKSIGDGGDLQGVNLDYFAEKGGQ 87
           + F+ +  S  ++L    LA  A+       FNP +L    D       +L  + +  GQ
Sbjct: 6   KPFIHRLSSMLVILCGLALAIFAQQVMADDYFNPALLDI--DNPQQGKTDLSVYEKGPGQ 63

Query: 88  MPGTYQVDVYLNNQQVDSRNVEFVSLPDAPGK--LYGAITPAEMADYGVKLDVFPDLKAV 145
            PG YQV++++NN ++D+R+V F  + DA G   L    +  E+ + G+K   +P L A 
Sbjct: 64  APGKYQVNIFINNNKIDTRDVTFKLIKDAQGNHSLQPCFSLDELKNLGIKTRQYPPLMAK 123

Query: 146 APDAKLTRPLSAYVPQATENLDLNRKRYDITVPQIGVNVRPRNSVDPKRWDNGIPAFMLN 205
              A +       +P A+    +  ++  +++PQ  +   PR  +DPK +D GI A +LN
Sbjct: 124 GQCADINA-----IPAASATFQVRHQQLLLSIPQTALGQVPRGYIDPKTFDEGITAGLLN 178

Query: 206 YSYSGSTTQRDNSGQ--SQSNFVNLRSGANLGAWRLRNYSTYNNQQ--NEGSHGGDDTNT 261
           YS + S +     G+  + S +VNLR G N+GAWR+RNYST+N     NE  H       
Sbjct: 179 YSATASQSHARVQGEQDNSSQYVNLRPGLNVGAWRIRNYSTWNRSTTGNEEEH------- 231

Query: 262 SNFESINTYVQRDVRFLQGGQLTLGEYSTPADVFDSIQFTGAQLASDDQMLPDSMSQFAP 321
             F S+ TY QRD+  ++   +T+G+ ++P+DVFDS+ +TG +L SD  MLPDS   +AP
Sbjct: 232 -RFSSVYTYAQRDIVAMKS-DMTVGQSTSPSDVFDSVPYTGVELKSDTDMLPDSEKGYAP 289

Query: 322 TVRGIAKSNAQVTIKQNGYVIYQSNVSPGPFAITDLYPSGNGGDMEVTVTESDGSATKFN 381
            +RG A SNA V ++QNGYVIYQ+ V+PG F I DLYP+G+ GD++VTV E+DGS + F 
Sbjct: 290 IIRGTAHSNALVMVRQNGYVIYQNTVAPGAFEINDLYPTGSSGDLQVTVKETDGSESHFV 349

Query: 382 IATSSVPILQREGRFKYNMALGKYRTGNDDTETPNFIQLSNIYGLTARTTVYGGVQYAEN 441
           +  +SVP+LQRE   +Y++  G+YR+ + D E   F + S IYG+    T YGG Q + +
Sbjct: 350 VPYASVPVLQREKNLRYSVTAGRYRSYDKDVEQTPFAEGSAIYGMPLGFTAYGGAQQSRH 409

Query: 442 YRAANVGVGFDLGSAGAVSFDATQATSEFEDSTDTQKGQSYRAMYAKNFEATDTNLQIAG 501
           Y++  +GVG +LG  GA S D T+A +  +    T KG+S+R  Y+K+F A+ T+  +AG
Sbjct: 410 YQSRALGVGKNLGDLGAFSLDVTRAKALLKKQ-QTSKGRSWRVRYSKDFVASGTHFSLAG 468

Query: 502 YRYSTEGYYAFSDVQDYQKETDSDFDNYNRSHNQRSKMQLSVNQSI-GDYGSIYVSGSQQ 560
           YRY+++G+Y   D  +    +D      +    +R++ + +V+Q++   +GS+ +S  ++
Sbjct: 469 YRYNSKGFYTLEDTMESYTRSDDG----SAPQQRRARTEATVDQTLPAGWGSVTLSLVKE 524

Query: 561 DYWGGDGKEQLLQLGYNTSIYGISYGFNYNYSKNPGMTEA-------DQVFAFNMSVPLD 613
            YW        + + YN S +G+SY  +Y+ +KN   ++A       D  F+ N+SVPLD
Sbjct: 525 TYWSQSQDMTSMSVSYNNSWHGVSYSLSYSMNKNTQDSDANGDDVMNDNQFSLNVSVPLD 584

Query: 614 RFIGSSGASATYNMSSKKHGSTVQQAGVSGTLLQGDNLSYSVQQGYENQGNGASGNASMD 673
           R++ ++ A  TYN+++ K G+T Q  G++GT L+GDNL++++Q+G  + G+G S + + D
Sbjct: 585 RWMHNTWA--TYNLNNTKDGTT-QNIGLNGTALKGDNLNWNIQEGLSSTGSGNSTSMNAD 641

Query: 674 YKGGSGEGNLGYSYDQESRQWSYGIQGGILLHENGITLSQPLGDTVTLVKAPGADDVNVE 733
           YK   GE + G S D+  +  + G+QGG ++H NGITLSQPLG+T+ LVKAPG    ++ 
Sbjct: 642 YKATYGEVSGGVSQDKYQQTVNVGLQGGAIVHANGITLSQPLGETIALVKAPGTHGTHIA 701

Query: 734 NNSGVHTDWRGYAVVPYAQPYRKNSVTLETESFADDVDMDMNTQTVIPTRGAVVRAEFKT 793
           N +GV TD+RGY VVP+  PYR N++ L+TE+  D+ D+      V PTRGAVVRA F T
Sbjct: 702 NQTGVETDFRGYTVVPFVTPYRHNTIALDTETLPDEADVTHAAYVVTPTRGAVVRASFNT 761

Query: 794 RVGQRALVQLLFMGKPVPFGATVSLLDNDSTVTGIVSDNGEVYLTGLPETGNIMAKWGNG 853
           RVG R L+ L   GKP+PFGATV+  D DS    IV ++G+ YL+GLP+ G++   WG  
Sbjct: 762 RVGSRVLMTLTHNGKPLPFGATVTTEDKDSEF--IVGNDGQTYLSGLPKQGHLAVTWGQD 819

Query: 854 SNEQCKGAYSLTSSNASDPSALIKQITAQCH 884
           ++E C+  Y LT          I    AQCH
Sbjct: 820 ASEHCEADYVLTDET---EKTNILNAAAQCH 847