Pairwise Alignments

Query, 150 a.a., ribosome maturation factor RimP from Rahnella sp. WP5

Subject, 152 a.a., FIG000325: clustered with transcription termination protein NusA from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (354), Expect = 7e-39
 Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 2/150 (1%)

Query: 2   STLEQKLTELITAPVEALGFELVGIEF-VRARQSTLRIYIDSDAGINVDDCADVSHQVSA 60
           S LEQ L  L+   V ALG+E  GIEF  + R S LR+YID + G+ VDDCA VS Q+S 
Sbjct: 3   SKLEQ-LQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDKEGGVLVDDCAIVSRQISG 61

Query: 61  VLDVEDPVTVAYNLEVSSPGLDRPMFTAEHYQRFLGDEVSVVLRMAVQNRRKWQGIIKAV 120
           VLDVEDP+T  Y LEVSSPG++RP+FT E +  F G++V + LR   + RR +QG+++ V
Sbjct: 62  VLDVEDPITSEYTLEVSSPGMERPLFTLEQFASFAGEQVKIKLRSPFEGRRNFQGLLRGV 121

Query: 121 EGEMITVTVEGKDEVFALSNIQKANLVPHF 150
           E + + V V+  + +  +  I KAN++P F
Sbjct: 122 EEQDVVVQVDDHEFLLPIDMIDKANIIPSF 151