Pairwise Alignments

Query, 640 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Rahnella sp. WP5

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  311 bits (798), Expect = 3e-89
 Identities = 199/497 (40%), Positives = 281/497 (56%), Gaps = 45/497 (9%)

Query: 7   TSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLL 66
           T+FADLGLS  ++SA+TD GY  P+PIQ   IP  L  RD+LG+AQTG+GKTA+F LP+L
Sbjct: 2   TNFADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPML 61

Query: 67  HNID---ASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRAL 123
             ++   A  + P+ L+L PTRELA QVAE    + K+ H +N+  L GG  +D Q R L
Sbjct: 62  TLLEKGRARARMPRTLILEPTRELAAQVAENFDKYGKN-HKLNIALLIGGVSFDEQDRKL 120

Query: 124 RQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQ 183
            +G  V++ TPGRLLDH +RG L ++ +  LV+DEAD ML MGFI D+E I   IP   Q
Sbjct: 121 ERGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQ 180

Query: 184 TALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGLR-KNEALVRFL- 241
           T  FSATMP  I+++  RF+++P+ + +    +T   ++Q + + +G   +  A++R L 
Sbjct: 181 TLFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELI 240

Query: 242 -EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDIL 300
              ED   AIIF   K    E+  +L+R G+S  AL+GDM+Q  R   L   KDG + +L
Sbjct: 241 RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLL 300

Query: 301 IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN 360
           +A+DVAARGLD+  +S V N+D+P+ +E YVHRIGRTGRAGR+G A   V  RE +    
Sbjct: 301 VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDA 360

Query: 361 IERTMKLTIPEVEIPTAEVLGERRLAKFAAKVQQQLESSDLDQYRALLAKLQPAEELDVE 420
           IE   KL   +VE    ++          +++ + +ES D  + R    +          
Sbjct: 361 IE---KLIGQKVEWFNGDL----------SELPEPMESHDSRRDRGSDGR---------- 397

Query: 421 TLAAALLKMAQGERPLIVAAD--PVFKSRPPRREFEERGDRGD------RGDRRDRPVRS 472
                  K  + ERP  V AD  PV  S     E E   +R D        D +DR    
Sbjct: 398 -------KDRKRERPGKVHADRKPVTASGNNTEELETVPERVDAVKIERNADSKDRHNGR 450

Query: 473 NDRPARDGDSPRRERRD 489
           +DRP R  ++   + RD
Sbjct: 451 SDRPGRAQNAANDDNRD 467