Pairwise Alignments

Query, 390 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 907 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 26/336 (7%)

Query: 42  IFPLLLFGLISSNFSEGTLLD---LPVSVVDNDHSPLSKTLIRKLDAGSHAHVQAFEGGL 98
           IF +++FG        G  LD   L  +V D D +P S+  +       +   Q      
Sbjct: 565 IFMMVIFGY-------GISLDVEKLAFAVYDQDQTPQSRAYLEAFRGSRYFSEQPSIRDA 617

Query: 99  PEAEYRLRTAQDYALLYIPNDFEADVLAGKQPSAVLYYNALFYGAGLYSTQDFSGLITEL 158
            E   RL+ ++    L IP  F  D+ AG+QP+   + +    G   +  +     +  +
Sbjct: 618 AELHRRLQRSEIKLALEIPPGFGRDLYAGRQPTVAAWLD----GGMPFRAETSRNYVEAV 673

Query: 159 NTRYRSIIATEMGKTLPSLASVDVSYGSLFNASGSYIYYQQFAATIHLLQLFTVTCMIYV 218
           +      +A +    L   ++  +   + F  +   +        +  L L  +  M+  
Sbjct: 674 HLANIEQLAEQSSPALNRQSAAKLE--TRFRYNQDVVSVNAIGPGVMALILAFIPAMLTA 731

Query: 219 M--ARSQALLSAPSFTLA-------LLGKLAPYTLCFTTLLMAEIAMLVGFFDARVSGNP 269
           +   R + L S  +F          LLGK APY L     L    AM    F     G+ 
Sbjct: 732 LGIVREKELGSITNFYATPLTRLEFLLGKQAPYLLVSLINLAVLTAMNRWLFGVPFKGSA 791

Query: 270 LYMLLIGFFYVIAAQSLGLLLFTFTKTTITAYTMMGIFVSI-ALTFSGMAVPVLSMPLPA 328
           L +   G  YV+A  S+GLL+  FT+T I A     I  S+  + FSG+ VP  S+   A
Sbjct: 792 LTLAFGGLLYVLATTSMGLLISAFTRTQIAAILGTMIITSLPTIQFSGLIVPRSSLDGAA 851

Query: 329 RIISGIEPLSYALAAMFDVFLREVSVRGILMVCCIL 364
            ++  + P  Y L      F + + +R +   C  L
Sbjct: 852 AVMGMLFPAGYFLDITVGTFTKALDIRQLWPQCLAL 887