Pairwise Alignments

Query, 383 a.a., 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG from Rahnella sp. WP5

Subject, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 77/277 (27%), Positives = 118/277 (42%), Gaps = 19/277 (6%)

Query: 110 INPGLVIIKVPKTLALLEQQLLALREVVTPDTQIIAGAKARDIHTSTLQLF------EKI 163
           +N  L+++  PK     E  L  L   +   T+I+   + R    S  ++F       K 
Sbjct: 75  LNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGPIHKY 134

Query: 164 LGPTKTSLAWKKARLIHCEATLPAQTAEPVISEWALD--DSEFRISNHANVFSRGGLDVG 221
               + S  W      HC  T  A   E     +A+D    E  I +   VFS G  D+G
Sbjct: 135 DSARRCSFYWG-----HCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLG 189

Query: 222 ARFFMQHLPEGIEGRMADLGCGNGVIGMTALALNPDAEMLFVDESYMAVESSRINVENNL 281
           +R  +  LP  + G++ D+G G GV+G     LNP  E+   D S +A+ SS    +  L
Sbjct: 190 SRLLLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSS----QETL 244

Query: 282 PQDVSRCHFEVNNMLAGVERETLHAVLCNPPFHQGTVISDDTAWRMFCDAKRCLQTGGEL 341
             +    H   ++M +       + ++ NPPFH G   S     R+  ++   L +GG +
Sbjct: 245 VANQLHGHVYPSDMFSDTGHH-YNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSI 303

Query: 342 RIVGNRHLDYYQKLRRLFGNCTTIATNQKFVILRAVK 378
            +V N  L Y   L + FG+C   A   KF I  A K
Sbjct: 304 WVVANSFLKYPPILEQAFGHCDIAAKTNKFAIYHAKK 340