Pairwise Alignments

Query, 383 a.a., 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG from Rahnella sp. WP5

Subject, 377 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  274 bits (701), Expect = 3e-78
 Identities = 157/373 (42%), Positives = 224/373 (60%), Gaps = 12/373 (3%)

Query: 13  LQLRLERYPLEEAATQLQAWEAADEYLLQNLNTDALNGRPLLIFNDAFGTLACALQPHNP 72
           ++L L RYP  + +  LQAW+AADE+L+ +L        P  I ND+FG L+CAL   NP
Sbjct: 10  IELELFRYPASQESN-LQAWDAADEHLINSLIEGGQIAVPTAIINDSFGALSCALSRINP 68

Query: 73  T----SVNDSFMSQLAMRHNLRLNGFDEDSVAAQSSLVPLPINPGLVIIKVPKTLALLEQ 128
                   D+  S L    N   N    D++   +S   LP +  LV++K+PK L     
Sbjct: 69  NWPLRVETDARTSFLGTEQNHHRNQLPMDNLQWFTSRDTLPKDVALVLMKLPKNLTYFAH 128

Query: 129 QLLALREVVTPDTQIIAGAKARDIHTSTLQLFEKILGPTKTSLAWKKARLIHCEATLPAQ 188
           QL+ L +++    +++ GAKA+ I++S L LF K LGP   SLAWKK R+I C +    +
Sbjct: 129 QLMRLSQILPAGCRVLVGAKAKSINSSLLALFAKHLGPANASLAWKKTRVITCISDGKPR 188

Query: 189 TAEPVISEWALDDSEFRISNHANVFSRGGLDVGARFFMQHLPEGIEGRMADLGCGNGVIG 248
                I+ W + +    ISN +NVF+   LD+GAR  + +LP+G    + DLGCGNGV+G
Sbjct: 189 ALPNGIT-WNIPEFNLTISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDLGCGNGVLG 247

Query: 249 MTALALNPDAEMLFVDESYMAVESSRIN-VENNLPQDVSRCHFE--VNNMLAGVERETLH 305
           + A  L P+A++ F+D+S MAV S++ N   N L +     H++  + ++   +E +   
Sbjct: 248 LRAAQLYPNADIHFIDDSEMAVASAKANWTMNQLAEGKGHFHWDDCMTHLPEDIEPDL-- 305

Query: 306 AVLCNPPFHQGTVISDDTAWRMFCDAKRCLQTGGELRIVGNRHLDYYQKLRRLFGNCTTI 365
            VLCNPPFHQG  I+D  AW+MF DA+R L+ GG L IVGNRHL Y+ KL+RLF NCTT+
Sbjct: 306 -VLCNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTV 364

Query: 366 ATNQKFVILRAVK 378
           A+N KFVIL+A K
Sbjct: 365 ASNGKFVILQAQK 377