Pairwise Alignments

Query, 672 a.a., cyclic di-GMP phosphodiesterase from Rahnella sp. WP5

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  333 bits (854), Expect = 2e-95
 Identities = 195/548 (35%), Positives = 315/548 (57%), Gaps = 30/548 (5%)

Query: 123 IVIIDQEGKIHRFNRLSEEYTGLREEDVIGRSAYDLFMSMEEGLASRQNINGFFQHQQSY 182
           IV+++++  +   N   E  TGL  +D+ GR A  LF S   GL         F    + 
Sbjct: 301 IVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPAR-LFAS---GLHEND-----FLATVAA 351

Query: 183 EVER---WINTVKGQRLFLFRNKFVHSGS---------GKQQKYLICSGSDITDERKAQE 230
           EV+R   W   + G+R    R    +SG            +  + + + +DIT  ++ +E
Sbjct: 352 EVDRAGLWRGEIWGER----REGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEE 407

Query: 231 RLRVLANTDLVTGFANRNALQESLARAL--IERGENNVGLIYLDLDNFKKVNDAYGHMFG 288
            +R  AN D++T   NR+ + + L +A+   +R    V +++LDLD FK++ND+YGH  G
Sbjct: 408 HIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAG 467

Query: 289 DHLLRAVSDAIQDCLSPNDKLARLGGDEFIILSTHAEIKALEA-LSQRVLRRLSLPFRIG 347
           D +L+  +  +++C+  +D + RLGGDEFI++ ++ E +   A +++++L  LS PF IG
Sbjct: 468 DEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIG 527

Query: 348 LIEVYTGCSAGIAICPEHGTDGDILLQNADTAMYAAKEKGKNVHCVFSPEMNEKASEYMW 407
             EV+   S GI   P+HG     LL+NAD AMY AK+ G+  + +F+P+M  ++   + 
Sbjct: 528 GTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLT 587

Query: 408 LDTHLRKALSEKDQLVLHYQPKVSLYGTVQSVEALLRWNSPERGLIQPQSFIPYAEESGL 467
           +++ LR AL+ +D+  LH+QPKV    T+   EAL+RW  PE+GLI P  FIP AEESGL
Sbjct: 588 MESDLRHALA-RDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGL 646

Query: 468 ITPVGKWVIETATRQATEWQKKGLNL-RVAVNLSGRQLNNSAFITTLSDAMKNAGMKGCL 526
           I P+G+W +  A  +   W+ +GL +  V+VN+S RQ  +   + T+   +   G++   
Sbjct: 647 ILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEA 706

Query: 527 LDFELTESCLVEDEGAAITMINQLHKLGAQVHLDDFGTGYSSLSQLARIPLDCIKLDQSF 586
           LD E+TE+ +  D   A+  +  L  LG  + +DDFGTGYSSL+ L   P+D +K+DQ+F
Sbjct: 707 LDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTF 766

Query: 587 IRGINDNPVSQALVRAIVAVAKTLQLTVVAEGVETAEEEKLIDEIGVDSKQGFLYAKPMP 646
           +R +  +    A+V  I+A+A+ L  +VVAEGVE  E+ + +      + QGFLY++P+P
Sbjct: 767 VRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLP 826

Query: 647 ANELEHWL 654
             E   +L
Sbjct: 827 PAEFTTFL 834