Pairwise Alignments

Query, 354 a.a., recombinase RecA from Rahnella sp. WP5

Subject, 347 a.a., protein RecA from Pseudomonas stutzeri RCH2

 Score =  499 bits (1286), Expect = e-146
 Identities = 249/344 (72%), Positives = 294/344 (85%)

Query: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
           +DENK++ALAAALGQIEKQFGKG++MR+G+     +  ISTGSL LDIALG GGLP GRI
Sbjct: 1   MDENKKRALAAALGQIEKQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60

Query: 63  VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDT 120

Query: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D L RS AVDVIIVDSVAAL PKAEIEGE+GD+H+GL AR+MSQA+RK+ GN
Sbjct: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 180

Query: 183 LKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVGSE 242
           +KNAN L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR GA+KEGD VVGSE
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIGQG 302
           TRVKVVKNK+A PF+QAEFQILYG+GI  +GE+IDLGV+  L+EK+GAWY+Y G KIGQG
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRSGEVIDLGVQQGLVEKSGAWYAYKGNKIGQG 300

Query: 303 KANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTAEDADD 346
           KAN+  +L++NP++  E+++++RD LL  +G       +ED  D
Sbjct: 301 KANAAKFLEDNPEIGREIEQQIRDKLLVVSGGSKANVVSEDLAD 344