Pairwise Alignments

Query, 354 a.a., recombinase RecA from Rahnella sp. WP5

Subject, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

 Score =  572 bits (1473), Expect = e-168
 Identities = 286/344 (83%), Positives = 317/344 (92%)

Query: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
           +DENKQKALAAALGQIEKQFGKGSIMRLG++R+MDVETISTGSLSLDIALGAGGLPMGRI
Sbjct: 1   MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60

Query: 63  VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
           VEI+GPESSGKTTLTL++IAAAQREGKTCAFIDAEHALDP+YAKKLGV+ID LL SQPDT
Sbjct: 61  VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120

Query: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEICDAL RSGAVDVI+VDSVAALTPKAEIEGE+GDSHMGL ARM+SQAMRKL GN
Sbjct: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180

Query: 183 LKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVGSE 242
           LK +N + IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRR GAIKEG+ VVG+E
Sbjct: 181 LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE 240

Query: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIGQG 302
           TR+KVVKNKIAAPFK+A  QI+YG+G N  GELIDLGVKHK++EK+GAWYSYNG+KIGQG
Sbjct: 241 TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQG 300

Query: 303 KANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTAEDADD 346
           KAN+C YLKENP++A  LDKKLR+MLL+      +A T+  ADD
Sbjct: 301 KANACKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAADD 344