Pairwise Alignments

Query, 354 a.a., recombinase RecA from Rahnella sp. WP5

Subject, 353 a.a., recombinase A (RefSeq) from Shewanella loihica PV-4

 Score =  580 bits (1494), Expect = e-170
 Identities = 296/354 (83%), Positives = 323/354 (91%), Gaps = 1/354 (0%)

Query: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG 60
           M ID NK+KAL+A LGQIEKQFGKGSIM+LGE+RSMDVETISTGSLSLD+ALGAGGLP+G
Sbjct: 1   MKIDANKEKALSAVLGQIEKQFGKGSIMKLGENRSMDVETISTGSLSLDVALGAGGLPLG 60

Query: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP 120
           RIVEIYGPESSGKTTLTL+VIAAAQREGK CAFIDAEHALDPIYA+KLGVDIDNLLCSQP
Sbjct: 61  RIVEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPIYAQKLGVDIDNLLCSQP 120

Query: 121 DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
Sbjct: 121 DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180

Query: 181 GNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVG 240
           GNLK +NTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRR GAIK+ + V+G
Sbjct: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG 240

Query: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIG 300
           +ETRVKVVKNKIAAPFKQAEFQILYGEGIN  GEL+DLGV HKLIEK+GAWYSY G+KIG
Sbjct: 241 NETRVKVVKNKIAAPFKQAEFQILYGEGINRTGELVDLGVMHKLIEKSGAWYSYKGDKIG 300

Query: 301 QGKANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTAEDADDNMETSEEF 354
           QG+AN+  YL ENP++ AE+D+ LR MLL G G+    +   D + ++ET E F
Sbjct: 301 QGRANAGKYLVENPEIGAEIDQALRAMLLGG-GQAVAQSATGDENVDLETGEVF 353