Pairwise Alignments

Query, 344 a.a., protease modulator HflC from Rahnella sp. WP5

Subject, 292 a.a., HflC protein (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (256), Expect = 7e-27
 Identities = 77/302 (25%), Positives = 137/302 (45%), Gaps = 21/302 (6%)

Query: 41  RVTVAIVLVALIAATACLVQVRSGEAMVITRFGNPVRV-----LLQPGLAWHLPVPLETA 95
           R++V I  + +    + L+ V  GE  +++RFG  ++      + +PGL   LPV ++  
Sbjct: 3   RLSVIIAAILVAMGLSSLMVVNEGERAIVSRFGKIIKDEGVTRIYKPGLHIKLPV-IDKI 61

Query: 96  IPVDLRIRTTSSGLQDVGTRDGLRIIVQAYTVWQVKNDPQHVQRFIRAVQNQPDMAAAQI 155
             +D RI+T         T +   ++V +Y  W++K+   H + ++         A + +
Sbjct: 62  KYLDSRIQTMDGAADRFVTSEKKDLMVDSYVKWRIKD---HEKYYLATNGGNKVQAESLL 118

Query: 156 RTFIGSALETTTSGFALADLVNTDASKIRLSGFEQHLHDQIARQLLDS---YGIELVQVG 212
           +  I + L T      + D+V         SG    L     R   DS    GIE+V V 
Sbjct: 119 QRKINNDLRTEFGRRTIKDIV---------SGSRDELQQDALRNASDSAQDLGIEVVDVR 169

Query: 213 VERLTLPSVTLDATVDRMRAERETIATERSAEGKRQAAEIRSSAERDARVIKADASVSAA 272
           V+++ LP+    +   RMRAER  +A E  A+GK Q+  IR+  +    +  A+A   A 
Sbjct: 170 VKQINLPANVSSSIYQRMRAERTAVAKEHRAQGKEQSEIIRAKTDASVTIQIAEAERKAL 229

Query: 273 NIEAQAQVQSAAIYAKARTSNPELYDLLRSLDTLNSVITPGTRLVLRTDAAPFRQLVEGP 332
            +  +    +A IYA A   +PE +  LRSL+   +    G+ +++      F + ++  
Sbjct: 230 QVRGEGDAIAAKIYADAYKKDPEFFSFLRSLEAYQASFGNGSNVMVLEPEGDFFKYMKSA 289

Query: 333 PA 334
            A
Sbjct: 290 DA 291