Pairwise Alignments

Query, 555 a.a., C4-dicarboxylic acid transporter DauA from Rahnella sp. WP5

Subject, 588 a.a., sulfate permease family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  623 bits (1607), Expect = 0.0
 Identities = 316/559 (56%), Positives = 429/559 (76%), Gaps = 12/559 (2%)

Query: 9   IRPFSALIDACFREKYTLQRLLKDAIAGVTVGIIAIPLAMALAIGSGVPPQYGLYTSAIA 68
           +R   AL +AC +++Y+ +R  +D +AG+TVGIIAIPLAMALAI SGVPPQYGLYT+ + 
Sbjct: 14  LRIAHALNEACVKDRYSFKRFGQDLLAGLTVGIIAIPLAMALAIASGVPPQYGLYTAIVG 73

Query: 69  GIVIAVFGGSRFSVSGPTAAFVVILYPVSQQFGLSGLLLATLMSGFMLLFMGLARFGRLI 128
           G +IA+ GGSR+SVSGPTAAFVV+LYP++QQFGL+GLL+AT+MSG ML+ M + R GRLI
Sbjct: 74  GFIIAMTGGSRYSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMMLVAMAMLRLGRLI 133

Query: 129 EYIPLPVTLGFTSGIAITIGTMQFKDFFGLTMATVPEHYLSKVAALVMALPTLDIGDAAI 188
            YIP  VTLGFT+GI + I T+Q KDFFGL +  +PE Y +K+ AL  ALP+L +    I
Sbjct: 134 LYIPESVTLGFTAGIGVVIATLQLKDFFGLQIEHMPEQYFAKLMALGQALPSLHLPSLFI 193

Query: 189 GIVTLGILILWPKLGLRVPGHLPALLAGCAVMAIFMQAGHPVATIGSRFHFLLPDGSQGN 248
              TL  ++LWP+L + VP HLPA+  G  +  I    G  + TIG+RFH+ L DG  G+
Sbjct: 194 AAATLATMLLWPRLKIPVPAHLPAIALGSILALILNAMGAEIETIGTRFHYQLTDGGIGS 253

Query: 249 GIPPILPQFALPWTQSDGSGLSW----SLVQALLPAAFSMAMLGAIESLLCAVVLDGMTG 304
           GIP +LP F  PW Q+  +G ++    +  QALLPAAF++AMLGAIESLLCAVVLDGMTG
Sbjct: 254 GIPAVLPHFEWPWLQTGPNGQAFEFNLAAFQALLPAAFAIAMLGAIESLLCAVVLDGMTG 313

Query: 305 KKHHSDNELIGQGIGNMVSPFFGGITATAAIARSAANVRAGATSPVSAIIHSLLVILALL 364
           K+H +++EL+GQGIGN+++PFFGGI ATAAIARSAANV+AGA SP++++IH+L+V++ L+
Sbjct: 314 KRHSANSELLGQGIGNIIAPFFGGIPATAAIARSAANVKAGAQSPIASMIHALVVLIGLV 373

Query: 365 ILAPLLSWLPLAAMAALLLMVAWNMSEAHKVVDLLRRAPKDDILVMLTCMSLTVLFDMVI 424
            LA +L++LP++AMAALLL+VAWNMSEA K V LL+ AP  DILV L+C SLTV+FDMVI
Sbjct: 374 ALAGILAYLPMSAMAALLLVVAWNMSEAPKAVHLLKTAPTSDILVFLSCFSLTVIFDMVI 433

Query: 425 AITAGIVMASLLFMRRIAKLTRLTEVMAD-------IPEDTLVLRINGPLFFAAAERIFS 477
           AI+ GI++A+LLFM+ IA++T+L ++ ++       +P D  VL+INGPLFFAAA+RIF+
Sbjct: 434 AISVGIILAALLFMKEIAEMTKLYDISSNKRYVDQSLPADWAVLKINGPLFFAAADRIFA 493

Query: 478 ELQVRSEGKKVIILVWDRVAVLDAGGVSALRNFINTLP-EGTELRIAEIPFQPLKTLARA 536
           E+   ++ K+VI+L  D V++LDAGG++AL   I       T+L I ++ FQP++TLA+A
Sbjct: 494 EIASLTQDKQVIVLYLDGVSILDAGGLAALSKLIEKCKLNQTKLLITDLQFQPIRTLAKA 553

Query: 537 RMQPVEGKLSFHSSLHDAL 555
           ++QPVEG L F+ +L +AL
Sbjct: 554 KIQPVEGVLKFYPTLREAL 572