Pairwise Alignments

Query, 851 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Rahnella sp. WP5

Subject, 861 a.a., 1A family penicillin-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  788 bits (2034), Expect = 0.0
 Identities = 410/844 (48%), Positives = 554/844 (65%), Gaps = 14/844 (1%)

Query: 1   MKFVKYLLILAVCCILLGAASIFGLYKYIEPQLPDVATLKDVRLQTPMQVFSAEGDLIAQ 60
           MK+ K + I      LLG  +I   Y Y+ P LPDV TLK V+LQTP++++SA+G LI+Q
Sbjct: 1   MKWFKRITIALFSLALLGIGAIAAAYFYVLPDLPDVTTLKTVKLQTPLRIYSADGKLISQ 60

Query: 61  YGEKRRIPLKLDQIPPELVHAFIATEDSRFYEHHGVDPIGIFRAASVALVSGHASQGAST 120
           +GEKRRIP++ +Q+P +L++A + TED+RF+EH G+DPIGI RAA +   +G  SQGAST
Sbjct: 61  FGEKRRIPVEYEQVPQQLINAVLDTEDARFFEHKGIDPIGIIRAAVILATTGKKSQGAST 120

Query: 121 ITQQLARNFFLSPERTLTRKIKEAFLAIRIEQMMSKDEILELYLNKIYLGYRAYGVGAAA 180
           ITQQ+AR FFLS E+T  RKIKE FLA++IEQ +SK EIL LYLN+ +LG RAYGVGAAA
Sbjct: 121 ITQQVARGFFLSREKTYIRKIKEIFLALKIEQALSKKEILTLYLNRSFLGNRAYGVGAAA 180

Query: 181 QVYFGKNVNQLTLSEMAVIAGLPKAPSTFNPLYSHDRSLARRNTVLARMLDEKYITQAQY 240
           QVY+GK + +LTL EMA+IAGLP+APS  NP+ +  R++ RRN VL+RML+++ IT  +Y
Sbjct: 181 QVYYGKELEELTLPEMAMIAGLPQAPSAANPIRNPARAMNRRNWVLSRMLEKENITPDEY 240

Query: 241 DQARAEPLVANYHAPHIEFSAPYLTEMVRQEMVKRYG-DNAYNDGYMVYTTITKKTQLAA 299
            +A   P+ A YH   +E  APY++EM R  +V++ G + AY  GY VYTT+  + Q+ A
Sbjct: 241 QEAIRAPITAKYHGAEVELYAPYISEMARDYLVEKLGEEEAYTGGYNVYTTVDSRLQMLA 300

Query: 300 QEALRTNVLNYDMRHGYRGPSNQLWKV-GEPAWDQDKIVQSLKTLPVYGPLFPAVITATD 358
           QEALR NV  YD RHGYRG +  LW   G    D+ +IV  LK    +  L PA +    
Sbjct: 301 QEALRNNVYAYDERHGYRGATKVLWDAEGTAKLDETQIVTQLKQTQGFQGLEPAAVLEVA 360

Query: 359 DAQATATMSNRAVINLPFSGMRWARPYRNDNAQGPTPKKVTDVVRPGQQVWVRKVGDDWW 418
           +       +    + L + G++WAR + ++  QG  PK   ++++ G+QVW+R  G+ W 
Sbjct: 361 EQSVKVINAKGETLTLEWEGLKWARKFISNKRQGKAPKTAGEILKAGEQVWIRNNGNIWQ 420

Query: 419 LAQVPDVNSAIVSLNPNDGAIEALVGGFDFNQSKFNRANQAVRQLGSNIKPFLYTAAMDK 478
           L+Q+P+V SAIVSL+P DGAI  LVGG+ F+ S++NR  QA RQLGSNIKPF+YT A++K
Sbjct: 421 LSQIPEVASAIVSLDPKDGAIRTLVGGYSFHTSQYNRVTQAKRQLGSNIKPFIYTGALEK 480

Query: 479 GLTLATILNDMPITRWDAGAGTDWRPKNSPPTYYGPIRLRQGLGESKNVVMVRAMRAMGV 538
           G TLAT++N+ PI   D   GT WRPKNSP  Y GP RLR GL +S NV+ VRAMR  G+
Sbjct: 481 GYTLATLINNAPINNADIRQGTAWRPKNSPDKYTGPTRLRVGLAQSINVMSVRAMRYTGL 540

Query: 539 DYAAEYLQRFGFPAANIVHSESLALGSASFTPLQVVRGYATLTNGGYLVDPYFITKIVDE 598
           + A + L +FGF   ++  +ESLALGS S TPLQVV  ++   NGGY V+PYFI  I + 
Sbjct: 541 ESAIDTLVKFGFDRDDLPQNESLALGSPSVTPLQVVTAFSVFANGGYRVEPYFIDHIDNA 600

Query: 599 SGQVQFEAKPKIACRTCNI-PVIYGDTQKSAVLSDDNVENVATSTINNNTSVPTPQLEQV 657
             Q   EA P +AC+   I P         A ++ +  ++   +       V + +    
Sbjct: 601 YEQTVEEASPTLACKPELIQPQTLPTDDPFAAMAQELPKHEVANQEVEGLEVASQEANAE 660

Query: 658 PPNSPQVDAAQQYAPHVISTPLSFLISDALNSNIFG------EPGWMGTGWRAGRDLKRH 711
            P+ P   +  ++AP +IS   +FLI++AL S I+G        GW GT WRA R + RH
Sbjct: 661 DPSCP---STARHAPQIISKQTAFLITEALKSVIWGGGDWSKGTGWNGTAWRAARVVNRH 717

Query: 712 DIGGKTGTTNSSKDAWFSGYGPDVVTSVWIGFDDHRRDLGRST-ASGVIPDQISGAEGGA 770
           DI GKTGTTN SKD WFSG+ P + T+VW+GFDDH  +LGR+   +    DQISGAE GA
Sbjct: 718 DIAGKTGTTNESKDTWFSGFTPTLATTVWVGFDDHSIELGRTAWNTNGAKDQISGAEAGA 777

Query: 771 KSAQPAWDDYMKAVLEGVPEQPQTPPPGVVTVTIDKSTGKLS-DGGGNSRPEYFIDGTQP 829
           K+A P W+++MK  L+G PE P  PP G+V+  ID +TGKLS      ++ EYFI GT+P
Sbjct: 778 KTAGPGWNEFMKNALQGTPELPSPPPEGIVSARIDLATGKLSRKTDYTTKFEYFIQGTEP 837

Query: 830 TEHA 833
            E A
Sbjct: 838 KEFA 841