Pairwise Alignments

Query, 376 a.a., hypothetical protein from Rahnella sp. WP5

Subject, 478 a.a., hemagglutinin from Burkholderia phytofirmans PsJN

 Score =  167 bits (422), Expect = 7e-46
 Identities = 117/335 (34%), Positives = 168/335 (50%), Gaps = 30/335 (8%)

Query: 64  GTSTAGNGSGTGSGTGAGTGSGGGTGTGGGTGT-----------TPSTTLASAT----IL 108
           G  +  N  G GSG G GT +   T T   T T           TP+ T  SA     ++
Sbjct: 22  GCGSTLNRPGVGSGAGGGTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTSANPVGVVV 81

Query: 109 SSAGTAVSGLGTQVSSIATQTPISNIPVAGTGVVT----IIDSTGKAVTDVGSGVKNGLG 164
            ++G  VS +G  VS++ +Q  ++ IP A     T    ++ + G  VT VG+GV NGLG
Sbjct: 82  QNSGNVVSAVGQTVSAVGSQIGLTPIPGANPATTTALGNVVSNLGSGVTAVGTGVANGLG 141

Query: 165 QLGTNPNAVGTTVAGVPIAVADLGTGVSGLG---TSLAANTTGTPVSGVTSAAGGLVNNV 221
           QLG + + +GTT+A     V + G  V+  G   TSL +  T  P+S +T+  G  V+ V
Sbjct: 142 QLGNSTDPLGTTLASSGNLVYNAGQSVNSAGQLVTSLGSGPTA-PLSPLTTPLGSAVSTV 200

Query: 222 GKVVTTTGNGLATNVQTGELSKVTTATTGIVTPVVAKVQGTTQAVGGATGLGAPVNGLLN 281
           G  V+  G  L + +  G + +VT   +  +TP+ + +  TTQ VG  TGLGAP+NGLL+
Sbjct: 201 GNAVSGLGTQLGSQLTNGPIQQVTQTVSTAITPITSTLAQTTQTVGDTTGLGAPLNGLLS 260

Query: 282 QVGTTVSGAGTQL--ATTTPALAGLGQVVTGTGQAVSKTGTILVPASSTTTSTASNSGGI 339
            VG  +  AG +L  AT  P    LG VVT  G  V+  G +L    + + +      GI
Sbjct: 261 TVGHGLDSAGGKLSGATGNPIGENLGNVVTKLGDTVTSAGGLLTAGGAGSGNPLGGITGI 320

Query: 340 ----SAGAGASVTQSGGLLAGV-GTTVGGLTGGLG 369
               S G G+ +     +L  + GT  GGLTGG G
Sbjct: 321 LNPGSGGTGSPLAPLTSILTALPGTLSGGLTGGTG 355



 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 67/253 (26%), Positives = 94/253 (37%), Gaps = 59/253 (23%)

Query: 45  SATTGDGTGSGTG--------TSTGGDGTSTAGN-GSGTGSGTGAGTGSGGGTGTGGGTG 95
           S  TG+  G   G        T T   G  TAG  GSG   G   G  + G  GTG    
Sbjct: 274 SGATGNPIGENLGNVVTKLGDTVTSAGGLLTAGGAGSGNPLGGITGILNPGSGGTGSPLA 333

Query: 96  TTPSTTLASATILSSAGTAVSGLGTQVSSIATQTPISNIPVAGTGVVTIIDSTGKAVTDV 155
              S   A    LS   T  +G G  ++      P++N+    TG               
Sbjct: 334 PLTSILTALPGTLSGGLTGGTGAGGPLA------PLTNVVTTLTG--------------- 372

Query: 156 GSGVKNGLGQLGTNPNAVGTTVAGVPIAVADLGTGVSGLGTSLAANTTGTPVSGVTSAAG 215
                 GLG  G+     G+ +A +   V+ +   +SG     A  + G P++ VTS   
Sbjct: 373 ------GLGGAGS-----GSPLAPLTGVVSSVTGALSG-----ATGSGGNPLAPVTSVVS 416

Query: 216 GLVNNVGKVVTTTGNGLATNVQTGELSKVTTATTGIVTPVVAKVQGTTQAVGGATGLGAP 275
            L   +G   T +GNG       G  S      TG+++ V   + G   + GG TG    
Sbjct: 417 TLTGALGS-ATGSGNG-------GGTSNPLAPITGLLSTVTGTLSGAATSAGGTTG---- 464

Query: 276 VNGLLNQVGTTVS 288
             GLL  +G+  S
Sbjct: 465 -GGLLGGLGSIAS 476