Pairwise Alignments

Query, 364 a.a., LPS export ABC transporter permease LptF from Rahnella sp. WP5

Subject, 380 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 66/321 (20%), Positives = 128/321 (39%), Gaps = 52/321 (16%)

Query: 56  VPEMAQLILPLSLFLGLLMTLGKLYTDSEITVMHACGLGKRSLVIAALVLA-LFTSVFAG 114
           VP    L++P++  L + +T  ++ TD E+  + A G+    ++ A LV   L   +   
Sbjct: 50  VPFFMLLVVPVACMLSVFLTFLRMSTDRELVALKAGGVSIYQMMAAPLVFCVLCAGLSLS 109

Query: 115 VNAIWLSPWSSKHQDEVLAEAKANPSMAAMVEGQFQQAQNGNAVLFVGSVKGKEFHNVFL 174
           ++  WLS W   +    + E     +   +  G F Q   G  +              F 
Sbjct: 110 ISLHWLS-WGMGNFRATIMEIANTRARIVIQPGVFNQDIPGLTL--------------FA 154

Query: 175 AQLRPNGNQRPSVVVADKGHMLQRADGSQQVMLDKGT------RYEGTALLRDFR----- 223
            Q+ P       V+V D+     R   +  ++  +GT      R E    LRD R     
Sbjct: 155 RQVDPATGNLRQVIVEDRS----RPGSTLTIVAPEGTTATDEVRGEILFHLRDGRIYKAD 210

Query: 224 -----VTDFTDYLAVIG----HQAVQLDPNQSDQMTMTQL--WNSNEPEAR--------- 263
                V  F++Y   +      + ++L   +  +M+  QL   + N  EA          
Sbjct: 211 GENVSVLGFSEYSVRLDLDKLFKGLELGEIKPKEMSWRQLAGLDLNRYEAEMGERYVRKV 270

Query: 264 -AELNWRLTLIVSVFIMALLVVPLSVVNPRQGRVLSMLPAILLYLIFFLLQTSLRSNGAK 322
             E++ R  L  +  ++ +  +PL+       R L +  A++++L+++ + +   S G  
Sbjct: 271 LVEVHKRWALPAACIVLGIFALPLACAFEGLRRQLGVALALVMFLVYYSMLSLGLSTGEA 330

Query: 323 GKLDPMLWMWGTNLLYFALAL 343
           G + P++ +W  N+L+    L
Sbjct: 331 GTVPPVVGLWAPNVLFLVAGL 351