Pairwise Alignments

Query, 364 a.a., GGDEF domain-containing protein from Rahnella sp. WP5

Subject, 243 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (277), Expect = 2e-29
 Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 16/178 (8%)

Query: 182 EREKFSDLSMLDPLTGLYNRRGLQNKLETLF----NQASGHYVMLLDIDHFKAYNDNYGH 237
           E  +   LS++DPLTGLYNRR  +  LE        + +   +++LD+DHFK  ND +GH
Sbjct: 72  EELRLERLSLVDPLTGLYNRRSFETALEKEMARWRRREAPVALLMLDLDHFKLVNDTWGH 131

Query: 238 TMGDQALVRVSAAIRDAVRSRDVVVRYGGEEFLVLMSNVKQEHAVRMAERIQNKVLGLNI 297
             GD+ L  ++  +   VR  D+  R GGEEF V+M  V  + A + AER++  V G   
Sbjct: 132 QAGDRVLQTLARLLSSTVRIEDLPARVGGEEFAVIMPEVTGDEAYQAAERLRLVVAG--- 188

Query: 298 PHLFNVEV-STHVTVSAGLAALE-----DGDFIKALGKADASLYNAKNSGRNKIFYAW 349
            HLF++ V S  V VS G+A  E     DG  +  L  AD +LY AK  GR+++  AW
Sbjct: 189 -HLFDIGVESIEVRVSIGVACTEMQNVADGATLVRL--ADEALYRAKQRGRDRVETAW 243