Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Rahnella sp. WP5

Subject, 527 a.a., peptide chain release factor RF-3 protein from Sinorhizobium meliloti 1021

 Score =  518 bits (1334), Expect = e-151
 Identities = 266/521 (51%), Positives = 354/521 (67%), Gaps = 9/521 (1%)

Query: 10  VAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSSHHAKSDWMEMEKQRGIS 69
           V++RRTFAIISHPDAGKTT+TEK+LLFG AIQ AG VK +      +SDWM++E++RGIS
Sbjct: 9   VSRRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGEVKAKKDRIQTRSDWMKIERERGIS 68

Query: 70  ITTSVMQFPYKQCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEV 129
           + TSVM F Y   + NLLDTPGHEDF++DTYRTLTAVD  +MVIDAAKG+E RT KL EV
Sbjct: 69  VVTSVMTFEYNDTVFNLLDTPGHEDFADDTYRTLTAVDAAVMVIDAAKGIEPRTLKLFEV 128

Query: 130 TRLRDTPILTFMNKLDRDIRDPMEVMDEVERELKIACSPITWPIGCGKLFKGVYHLYKDE 189
            RLRD PI+TF+NK+DR+ RDP E++DEVE++L + C+P+TWPIG  K F G YHL  DE
Sbjct: 129 CRLRDIPIITFVNKMDRESRDPFEILDEVEQKLALDCAPVTWPIGRSKTFCGTYHLATDE 188

Query: 190 VYLYQTGKGHTIQEVRVVKGLNNPEL-DVAVGEDLAAQLRDELELVQGASHEFDHEAFLQ 248
           V      +G   QE R+ K +N+PE+    + E+      +E  L   A   FD +AFL+
Sbjct: 189 V------RGADTQE-RLTK-VNDPEMASHRLPENERDTFIEETSLAIEACKPFDRKAFLE 240

Query: 249 GELTPVFFGTALGNFGVDHMLDGLVDWAPAPMPRKTDLREVKADDEKFTGFVFKIQANMD 308
           G LTPVFFG+AL NFGV  +++ L D+AP P  +  D+R V+A D++ T FVFKIQANMD
Sbjct: 241 GHLTPVFFGSALRNFGVRDLINALADFAPPPRAQVADIRTVEATDDRMTAFVFKIQANMD 300

Query: 309 PKHRDRVAFMRVVSGKYEKGMKLRQVRTGKDVVISDALTFMAGDRSHVEEAYPGDIIGLH 368
           P HRDR+AF+RV SGK E+GMK R  RTGK + ++    F A  R   + A+ GD++G+ 
Sbjct: 301 PNHRDRIAFVRVCSGKLERGMKARLSRTGKQMGLTAPQFFFASQRQLADTAFAGDVVGIP 360

Query: 369 NHGTIQIGDTFTQGENMKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVF 428
           NHGT++IGDT T+GE + F G+PNFAPE+ RR+RL D +K K+L + L Q++EEG VQ+F
Sbjct: 361 NHGTLRIGDTLTEGEPLVFQGVPNFAPEILRRVRLEDAMKAKKLKEALQQMAEEGVVQLF 420

Query: 429 RPIANNDLIVGAVGVLQFEVVVARLKSEYNVEAIYESVNVSTARWVECSDVKKFEEFKRK 488
            P      IVG VG LQ +V+  RL++EY++   +E    S  RW+        E+F   
Sbjct: 421 SPDDGAPAIVGVVGALQLDVLRERLQAEYSLPVSFEMSRFSICRWISAESPADLEKFIAT 480

Query: 489 NETNLALDGGDNLAYIAPTMVNLNLASERYPEVKFRKTREH 529
           +  ++A D   +  Y+A    +L   SERYP VK    +E+
Sbjct: 481 HRGDIARDLDGDPVYLAQDGFSLRYESERYPAVKMVAIKEY 521