Pairwise Alignments

Query, 275 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Rahnella sp. WP5

Subject, 267 a.a., dimethyladenosine transferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  135 bits (341), Expect = 7e-37
 Identities = 89/261 (34%), Positives = 138/261 (52%), Gaps = 8/261 (3%)

Query: 12  RKRFGQNFLTDQFVIDSIVSAIHPMPGEAVVEIGPGLAALTEPVASRLDSMTVIELDRDL 71
           +K  GQ+FL D  V   I   +   P   V+E+GPG+  LT+ +  +   + V+E+D + 
Sbjct: 7   KKFLGQHFLKDLKVAQDIADTVDTFPELPVLEVGPGMGVLTQFLVKKDRLVKVVEVDYES 66

Query: 72  ATRL-ENNPKFQGKLRVIQSDAMKINFGELSEELGQPLRVFGNLPYNISTPLMFHLFTYT 130
              L E  P  +    +I+ D +K+N   L +  G+P  + GN PYNIS+ + F +    
Sbjct: 67  VAYLREAYPSLED--HIIEDDFLKMNLHRLFD--GKPFVLTGNYPYNISSQIFFKMLENK 122

Query: 131 NAIKDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPESFTPAPKVESA 190
           + I     M+QKEV  R+ AGP SK YG L+V+ Q +  V  +  V    F P PKV+SA
Sbjct: 123 DIIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPPPKVKSA 182

Query: 191 VVRLVPHEVIPYPVPDIRILSRLTTDAFNQRRKTVRNSLGHLFTPE-QMTELGLDLSMRA 249
           V+R+  ++       D ++  ++    FNQRRKT+RNS+  +   +  +TE  L  + R 
Sbjct: 183 VIRMTRNDTKELGC-DEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDAL-FNKRP 240

Query: 250 ENISVEQFCKLANWLSTRPKT 270
           E +SVE+F  L N +    KT
Sbjct: 241 EQLSVEEFISLTNQVEEALKT 261