Pairwise Alignments

Query, 278 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 272 a.a., ABC transporter for Xylitol, permease component 2 (from data) from Dinoroseobacter shibae DFL-12

 Score = 89.4 bits (220), Expect = 8e-23
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 4/264 (1%)

Query: 4   TANGRLIVTISLLFFILVNLVWLGLPFSMAILWSLVDPQHPWSYPDLFPQVLSINRWIQV 63
           T+   L   I+LL  I+   V+   PF   +  SL         P ++    +++ + + 
Sbjct: 2   TSTRSLFSQIALLVLIITVCVF---PFYWMVTTSLKTQIVALEAPPVWIFEPTLSNYREA 58

Query: 64  WQQTSLSEALFNSYTIAPAVAMLSLLLSLPTAYAFGRMTFRGKAVAEMLTLIPLVMPGMI 123
             +  +   L NS  IA +   L+L+L +P A+A  R  FRGK       +   ++  ++
Sbjct: 59  LFEDGVLRTLINSLIIAISTTFLALVLGVPAAFALARFEFRGKKDLWFWFITNRMISPIV 118

Query: 124 IGIFFSAMLMNLNISNPFISIVLGHTVLTLPYSIRIMSAGFKAVPQDLIDASRDLGASHW 183
           + + F  +  NL + +  I+++L +    LP  I I++  F+ +P DL +A+R  GAS +
Sbjct: 119 LALPFFLIARNLGLLDKHITLILIYLTFNLPIVIWIVTDQFRGIPYDLDEAARLEGASQF 178

Query: 184 GTFCNAFLPMLKPSFLAALIFCLVRSLEEFSISYVLGAPDFITVPTILYSFL-GYSFVRP 242
                  LP+  P    + IF  + S  E     +L   +  T P +  SF+ GY+    
Sbjct: 179 TIMRKICLPLAMPGVAVSAIFSFIFSWNELMFGLILTRSEAKTAPAMAVSFMEGYNLPYG 238

Query: 243 DAAVVSMILVIPNVVLMVIIEKLL 266
                S ++VIP ++  +I  K L
Sbjct: 239 KIMATSTLIVIPVLIFALIASKQL 262