Pairwise Alignments

Query, 437 a.a., PAS domain-containing protein from Rahnella sp. WP5

Subject, 498 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 10/231 (4%)

Query: 214 SDVDDMLRKEEQKAWQNLLRVISHEINNSLSPIASISQMLQQHYRRHTENLPEGFAEGID 273
           S  + +   +   + + +   I+HEIN  L+ IA+ +Q   +   +  E +PE     ++
Sbjct: 245 SSREQLAHMDRVTSMEEIASSIAHEINQPLTAIATYAQAALRT-NKGDERVPEALINALE 303

Query: 274 LINRRAKELIAFISSYRQLSKLAPPVKAPLDFAALIAE----LPLLFAHRKITL-KGPAP 328
            I  +A      I + RQ        ++ +   AL+      L  L +  K++L +G A 
Sbjct: 304 KITEQALRAGEVIRTIRQFISKQASSRSEIGVKALLTSTSHLLETLESQYKVSLVQGLAD 363

Query: 329 LRVNV--DRVQIHQLLINLIKNADEATS-DTTAPVCIEWSEEKGCLFVTILDQGVGLTNP 385
            R+ V  D VQ+ Q+L NL++NA EA+  D+   + +E   +K  L +     G+     
Sbjct: 364 ERLTVIGDLVQLQQVLFNLLRNAMEASPPDSIIEIWVEVCGDKVSLRIRDRGCGIDAEAA 423

Query: 386 KNLFVPFYTTKPNGSGIGLILCRQIAESHGGYLSLENRHDRTGCRVTLNLP 436
           K +F PF+TTK  G G+GL +C+ I ++H G L L + ++  GC  T+ LP
Sbjct: 424 KEIFAPFFTTKQEGMGMGLAICKTIIDAHNGEL-LFSINEFGGCDFTMLLP 473