Pairwise Alignments

Query, 564 a.a., OmpA family protein from Rahnella sp. WP5

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 419 PPPPPPPVINQIVQGPKTIRLDSLSLFDVGKSELKTSSTKVLINALVGIKAKPGWLIVVA 478
           P P   PV    V    T +    S F    +ELK ++ + L   +  +   P   + V 
Sbjct: 186 PAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVV 245

Query: 479 GHTDDTGDDKSNQMLSLRRAESVRNWMRDTGDVSESCFAVQGYGESRPVATNDTPEGRAA 538
           GHTD TG +  NQ LS RRA++V   +   G +  S  + +G GES P+A+N T EGR  
Sbjct: 246 GHTDSTGSEAYNQKLSERRAQAVAKALEAQG-IDASRISAKGLGESSPIASNATAEGREK 304

Query: 539 NRRVEISLVPQ 549
           NRRVE+ ++P+
Sbjct: 305 NRRVEL-VIPE 314