Pairwise Alignments

Query, 856 a.a., type VI secretion system ATPase TssH from Rahnella sp. WP5

Subject, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas stutzeri RCH2

 Score =  524 bits (1350), Expect = e-153
 Identities = 328/865 (37%), Positives = 501/865 (57%), Gaps = 50/865 (5%)

Query: 9   VEKMNVEARECLDAAISLAVSRTHHEVDIEHLLLALVTRQPALIEQLCLNAGLRGDALVD 68
           ++++  + +  L  A S+AV   H  ++  HL+ AL+ +Q   I+ L +  G    AL  
Sbjct: 3   IDRLTSKLQLALSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIAALRQ 62

Query: 69  ALKVSLNHLRS--GNTRSPVLSELLVEHLEKSWLHASACWQQTQLPVQAFLGSLLASEKD 126
           AL   L+ L      T    LS+ L   L ++   A     Q        L +L ++ + 
Sbjct: 63  ALTKELDQLPKLQNPTGDMNLSQDLARLLNQADRLAQQKGDQYISSELVLLAALDSNTRL 122

Query: 127 NQIHLSSALQQALLCQVDRADRLLHDACAPAQATNHPAATRHNTDSAVMKFTRNLTEQAR 186
            ++ L+  + +  L   + A   L        A N P A    +  A+ K+T ++T++A 
Sbjct: 123 GKLLLAQGVSKKAL---ENAINNLRGG----DAVNDPNA--EESRQALDKYTVDMTKRAE 173

Query: 187 DAALDPALGREPEIRQLIDVLLRRRQNNPVLTGEPGVGKTALVEGLAQRIADGTVPEALK 246
           D  LDP +GR+ EIR+ I VL RR +NNPVL GEPGVGKTA+VEGLAQRI +G VP+ LK
Sbjct: 174 DGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLK 233

Query: 247 SMEILSLDMGLLQAGASVKGEFENRLQTLLREVKEYPSPVILFIDEAHTLIGAGGQAGQN 306
              +L+LDMG L AGA  +GEFE RL+ +L ++ +    VILFIDE HT++GAG   G  
Sbjct: 234 DKRLLALDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAM 293

Query: 307 DAANLLKPALARGEMRVVAATTWAEYKKYFEKDAALARRFQVIKVAEPDEETAIAMLRSL 366
           DA N+LKPALARGE+  V ATT  EY++Y EKDAAL RRFQ + V EP EE  IA+LR L
Sbjct: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGL 353

Query: 367 KPALSKHHGVQILESALVAAVRLSSRYISGRQLPDKSISLLDTACARVAISQCHEPKEIE 426
           K     HHGV I + A++AA +LS RYI+ RQLPDK+I L+D A +R+ +    +P+E++
Sbjct: 354 KERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELD 413

Query: 427 DLNAMISNIHTERESLLKEGENPS--RVKWLDQRESELKQSLEALLPVWRQQQQIV---A 481
            L+  +  +  ERE+L KE +  +  R+  L+   ++L +    L  +W+ ++  V   A
Sbjct: 414 RLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLAREYADLEEIWKSEKAEVQGSA 473

Query: 482 QI-NSIE-------------DVAQIAALR----------AQLAEMH--KDQALVYDCVDA 515
           QI   IE             D+A++A L+           ++ + H  K+  L+ + V  
Sbjct: 474 QIQQKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQHGKKENQLLRNKVTD 533

Query: 516 TCVADVIAGWTGIPLGRMMEKEQQQLGDLVARLESRVIGQSHALADIAQQIRIGRANLAD 575
             +A+V++ WTGIP+ +M+E E+ +L  +   L +RVIGQ  A+  ++  +R  RA LAD
Sbjct: 534 EEIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLAD 593

Query: 576 PVKPTGVFMLAGPSGVGKTETALALSELLFGGEQSLITINMSEYQEAHSVSGLKGSPPGY 635
           P +P+G F+  GP+GVGKTE   AL+E LF  E+++I I+MSE+ E HSV+ L G+PPGY
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGY 653

Query: 636 VGYGQGGVLTEAVRRRPYSVVLLDEVEKAHPDVMEIFYQVFDKGVMEDAEGQLINFRNTL 695
           VGY +GG LTEAVRR+PYSVVL+DEVEKAHPDV  +  QV + G + D+ G+ ++F+NT+
Sbjct: 654 VGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTV 713

Query: 696 IILTSNLASDRVMTACAAGNTDQKALTALLRPEFDQYFRPALMGRL-QLIPYLPVVGETL 754
           I++TSNL S ++         D  A  A +      +FRP  + R+ +++ + P+  E +
Sbjct: 714 IVMTSNLGSTQIQELVG----DPGAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQI 769

Query: 755 AKIIRLKIDKVCKRFSGAGEGNSSLSYSEKVVEFMASRCQVEQSGAREIDAVLNRELLPL 814
           A I  +++ ++ KR +   E   SL  S++ ++ + +       GAR +   + R +   
Sbjct: 770 AGIADIQLGRLRKRLA---ERELSLELSQEAMDKLIAVGYDPVYGARPLKRAIQRWIENP 826

Query: 815 LTDRLLAVESKADIRLQVGVSKDQL 839
           L  ++L+ +      ++  V  +Q+
Sbjct: 827 LAQQILSGQFAPGSSVKARVEGEQI 851