Pairwise Alignments

Query, 856 a.a., type VI secretion system ATPase TssH from Rahnella sp. WP5

Subject, 870 a.a., Chaperone clpB (NCBI) from Rhodospirillum rubrum S1H

 Score =  524 bits (1349), Expect = e-152
 Identities = 331/890 (37%), Positives = 492/890 (55%), Gaps = 70/890 (7%)

Query: 10  EKMNVEARECLDAAISLAVSRTHHEVDIEHLLLALVTRQPALIEQLCLNAGLRGDALVDA 69
           EK+   ++  L AA ++A+  TH +V  EHLL AL+  +  L   L   AG  GD L   
Sbjct: 4   EKLTDRSKGFLQAAQTIALRETHQQVTPEHLLKALLDDKEGLAANLIRAAG--GDPL--- 58

Query: 70  LKVSLNHLRSGNTRSPVLSELLVEHLEKSWLHASACWQQTQLPVQAFLGSLLASEKDNQI 129
                        R+       V+ L K        W Q+   V      +     D+ +
Sbjct: 59  -------------RAQEAVNREVDKLPKVQGAQQMYWAQSLARVIDQATRMAEKAGDSFV 105

Query: 130 HLSSALQQALLCQVDRADRLLHDACAPAQATNHP-----------AATRHNTDSAVMKFT 178
            +   L    +     A R+L +A A  Q  N             +A   +   A+ K+ 
Sbjct: 106 TVERLLIALAMAAETPAKRILAEAGATPQGLNKAVEDLRKGRKADSAGAESQYDALKKYA 165

Query: 179 RNLTEQARDAALDPALGREPEIRQLIDVLLRRRQNNPVLTGEPGVGKTALVEGLAQRIAD 238
           R+LTE AR+  LDP +GR+ EIR+ I VL RR +NNPVL GEPGVGKTA++EGLA RI +
Sbjct: 166 RDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVN 225

Query: 239 GTVPEALKSMEILSLDMGLLQAGASVKGEFENRLQTLLREVKEYPSPVILFIDEAHTLIG 298
           G VPE+L++ ++++LD+G + AGA  +GEFE RL+ +L EV      +ILFIDE HTLIG
Sbjct: 226 GDVPESLQNKKLMALDLGAMVAGAKFRGEFEERLKAMLTEVSAAEGEIILFIDEMHTLIG 285

Query: 299 AGGQAGQNDAANLLKPALARGEMRVVAATTWAEYKKYFEKDAALARRFQVIKVAEPDEET 358
           AG   G  DA+NLLKPALARG++  V ATT  EY+K+ EKDAALARRFQ + V+EP    
Sbjct: 286 AGAGEGAMDASNLLKPALARGDLHCVGATTLNEYRKHVEKDAALARRFQPVFVSEPGVAD 345

Query: 359 AIAMLRSLKPALSKHHGVQILESALVAAVRLSSRYISGRQLPDKSISLLDTACARVAISQ 418
            I++LR +K     HHGV+I ++ALVAA  LS+RYI+ R LPDK+I L+D A +R+ +  
Sbjct: 346 TISILRGIKEKYELHHGVRIADNALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMEV 405

Query: 419 CHEPKEIEDLNAMISNIHTERESLLKEGE--NPSRVKWLDQRESELKQSLEALLPVWRQQ 476
             +P+ +++L+  I  +  ERE+L KE +  + +R+  L++  ++L+     L   W+++
Sbjct: 406 DSKPEALDELDRRIIQLKIEREALRKEKDIASEARLSDLEKELADLESQSATLTEDWKRE 465

Query: 477 QQIVAQINSIE----------DVAQ---------------IAALRAQLAEMHKDQA---- 507
           ++ +A    I+          D+A+               I  L  +L E+         
Sbjct: 466 KEGLAGSTRIKEQLEQARGDLDIAKRQANWARAGELEYGVIPDLERRLGEVESGDGLAHR 525

Query: 508 ----LVYDCVDATCVADVIAGWTGIPLGRMMEKEQQQLGDLVARLESRVIGQSHALADIA 563
               LV + V A  +A V++ WTGIP+ +M+  E+++L  +   L SRV+GQ  A+  ++
Sbjct: 526 QGGKLVNEVVTAETIASVVSRWTGIPVDKMLAGEREKLLGMEKVLASRVVGQREAVVAVS 585

Query: 564 QQIRIGRANLADPVKPTGVFMLAGPSGVGKTETALALSELLFGGEQSLITINMSEYQEAH 623
             +R  RA L DP +P G F+  GP+GVGKTE   AL+  LF  EQ+++ I+MSEY E H
Sbjct: 586 NAVRRSRAGLQDPNRPMGSFLFLGPTGVGKTELTKALAAFLFDDEQAMVRIDMSEYMEKH 645

Query: 624 SVSGLKGSPPGYVGYGQGGVLTEAVRRRPYSVVLLDEVEKAHPDVMEIFYQVFDKGVMED 683
           +VS L G+PPGYVGY +GG LTEAVRRRPY V+L DEVEKAHPDV  +  QV D G + D
Sbjct: 646 AVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTD 705

Query: 684 AEGQLINFRNTLIILTSNLASDRVMTACAAGNTDQKALTALLRPEFDQYFRPALMGRL-Q 742
            +G+ ++FRNTLI+LTSNL +D  + A      D  A+   +       FRP  + RL +
Sbjct: 706 GQGRTVDFRNTLIVLTSNLGAD--ILANQPEGDDSGAVRGAVMEMVRAAFRPEFLNRLDE 763

Query: 743 LIPYLPVVGETLAKIIRLKIDKVCKRFSGAGEGNSSLSYSEKVVEFMASRCQVEQSGARE 802
           ++ +  +  E +A I+ +++ ++  R     +   +L   +   +++A R      GAR 
Sbjct: 764 ILLFHRLFRENMAGIVSIQLGRLADRLR---DRKMTLDLDDAARDWLAERGYDPVYGARP 820

Query: 803 IDAVLNRELLPLLTDRLLAVESKADIRLQVGVSKDQLTLTKQPASKRSAA 852
           +  V+ R L   L   +L    K    +++ V   +L +  +  S  +AA
Sbjct: 821 LKRVIQRSLENPLATLVLDGRIKDGDVIRITVEGGKLVVNGEALSLDTAA 870