Pairwise Alignments

Query, 856 a.a., type VI secretion system ATPase TssH from Rahnella sp. WP5

Subject, 877 a.a., type VI secretion ATPase, ClpV1 family from Marinobacter adhaerens HP15

 Score =  616 bits (1588), Expect = e-180
 Identities = 356/869 (40%), Positives = 525/869 (60%), Gaps = 48/869 (5%)

Query: 5   LKKIVEKMNVEARECLDAAISLAVSRTHHEVDIEHLLLALVTRQPALIEQLCLNAGLRGD 64
           L  ++ ++N  +R+ L+A+ +L +SR   E+   HLL  L+    + + Q+  + GL   
Sbjct: 6   LPALIGRLNDMSRQALEASAALCISRQGAEITPAHLLFKLLETPFSDVRQILEHTGLEHQ 65

Query: 65  ALVDALKVSLNHLRSGNTRSPVLSELLVEHLEKSWLHASACWQQTQLPVQA-FLGSLLAS 123
            L   +  SLN         P  S LLVE ++ +WL AS     T+L   A FL  L+ +
Sbjct: 66  QLQPLVGDSLNGESQSAEPYPSFSPLLVELMQDAWLLASTELGHTELRSGAVFLALLMNA 125

Query: 124 EKDNQIHLSSAL----QQALLCQVDRADRLLHDACAPAQATNHPAATRHNTDSAVMKFTR 179
           ++     ++ A+    ++ L  Q DR      +   P++          + D  + ++  
Sbjct: 126 DRYLMPRVAKAMVDINREQLRKQFDRFTEGSAERLEPSEQEPGQPVASVDLDP-LKRYAT 184

Query: 180 NLTEQARDAALDPALGREPEIRQLIDVLLRRRQNNPVLTGEPGVGKTALVEGLAQRIADG 239
           + T  AR+  LDP + R+ EI Q+ID+L RRR+NNP++ G+ GVGK+A+VEGLA RI +G
Sbjct: 185 DFTRLAREDKLDPVVCRDAEIDQMIDILCRRRKNNPIVVGDAGVGKSAVVEGLALRIVNG 244

Query: 240 TVPEALKSMEILSLDMGLLQAGASVKGEFENRLQTLLREVKEYPSPVILFIDEAHTLIGA 299
            VP+ LKS+E+ +LDMG LQAGASVKGEFE RL+ ++  VK   +P+ILFIDEAHTLIGA
Sbjct: 245 DVPDRLKSVELWTLDMGALQAGASVKGEFEKRLKGVIEAVKGSATPIILFIDEAHTLIGA 304

Query: 300 GGQAGQNDAANLLKPALARGEMRVVAATTWAEYKKYFEKDAALARRFQVIKVAEPDEETA 359
           G   G +DAANLLKPALARGE+R +AATTW EYKKYFEKD AL+RRFQ + + EP    A
Sbjct: 305 GNSEGGSDAANLLKPALARGELRTIAATTWREYKKYFEKDPALSRRFQPVALDEPTPGEA 364

Query: 360 IAMLRSLKPALSKHHGVQILESALVAAVRLSSRYISGRQLPDKSISLLDTACARVAISQC 419
           + +LR L+    K H V I +SAL AA  +S+RY++GRQLPDK+I +LDTACARV+++  
Sbjct: 365 VHILRGLRTVYEKAHQVLIADSALKAAAEMSARYLAGRQLPDKAIDVLDTACARVSLNLS 424

Query: 420 HEPKEIEDLNAMISNIHTE-----RESLLKEGENPSRVKWLDQRESELKQSLEALLPVWR 474
             P+ +  + + +  +  E     RE  L +  +  R + L+QR + +     AL   W 
Sbjct: 425 APPRRLSRVRSELYQLAMEQNLLCREHTLGQTVDAERERELEQRVAGITVESAALEQRWS 484

Query: 475 QQQQIVAQINSIEDV---------------------------AQIAALRAQLAEMHKDQA 507
            Q+++VA++  I +                            ++ AA+  +L E+  D+ 
Sbjct: 485 DQRELVARLVEIREKLLTGESQAEANTPELTDGITEERPDLKSEAAAIEQELTELQADEP 544

Query: 508 LVYDCVDATCVADVIAGWTGIPLGRMMEKEQQQLGDLVARLESRVIGQSHALADIAQQIR 567
           LV+  VDA  VA+VIA WTGIP+ RM   E +++  L A L+  + GQ  A+  + Q + 
Sbjct: 545 LVHTRVDARQVAEVIADWTGIPVNRMTTDELEKITHLPAYLQEHIKGQDTAIDCLHQHLL 604

Query: 568 IGRANLADPVKPTGVFMLAGPSGVGKTETALALSELLFGGEQSLITINMSEYQEAHSVSG 627
             RA+L  P +P G F+L GPSGVGKTET + L+ELL+GG Q L TINMSEYQE H+VS 
Sbjct: 605 TARADLRRPGRPMGAFLLVGPSGVGKTETVVQLAELLYGGRQFLTTINMSEYQEKHTVSR 664

Query: 628 LKGSPPGYVGYGQGGVLTEAVRRRPYSVVLLDEVEKAHPDVMEIFYQVFDKGVMEDAEGQ 687
           L GSPPGYVG+G+GG+LTEA+R++PYSVVLLDEVEKAHP+V+ +FYQ FDKG + D EG+
Sbjct: 665 LIGSPPGYVGFGEGGILTEAIRQKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGEGR 724

Query: 688 LINFRNTLIILTSNLASDRVMTACAAGNTDQKALTALLRPEFDQYFRPALMGRLQLIPYL 747
           LI+ +N +  LTSNL    ++    +      +L   L PE   +F+PAL+ R++++PYL
Sbjct: 725 LIDCKNVVFFLTSNLGYQTIVNHAES----PASLDEALYPELASFFKPALLARMEVVPYL 780

Query: 748 PVVGETLAKIIRLKIDKVCKRFSGAGEGNSSLSYSEKVVEFMASRCQVEQSGAREIDAVL 807
           P+  ETL +I+  K+ ++  +       ++ +   E ++E + +R    ++GAR +++++
Sbjct: 781 PLGEETLNRIVGDKLQRLADQIK--ARYHTEVELEEGLIEAIRNRATRSENGARMLESII 838

Query: 808 NRELLP----LLTDRLLAVESKADIRLQV 832
             ELLP     L ++L A E    + L V
Sbjct: 839 EGELLPPVSLALLEKLAAREPVKKVTLAV 867