Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 495 a.a., EvpB family type VI secretion protein from Pseudomonas fluorescens FW300-N2E3

 Score =  493 bits (1269), Expect = e-144
 Identities = 245/491 (49%), Positives = 347/491 (70%), Gaps = 6/491 (1%)

Query: 8   NASAQAEQSGD----YLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSNDLVG 63
           +A AQA +S +     LD+II   +    ES ++  +  L  F ++V    ++V  D V 
Sbjct: 6   SAQAQASESVNETLSLLDRIIAEGRMAHDESQKDYARDMLAEFATQVLDKDMVVDKDTVA 65

Query: 64  SIEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQSSVTENT-KVRVFNCTKKE 122
            I  RI+ ID+L+S+Q+++++  P+ Q++E+SWRGLH LVQ++ T +  K+R+ N T+KE
Sbjct: 66  MINDRISRIDKLISTQLNEVLHHPDLQKLEASWRGLHLLVQNTETSSRLKLRLLNVTQKE 125

Query: 123 LLRDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHVAA 182
           L  D + A +FDQS+LFK IYE EYGTFGG P+S  VGD+ F   P+D+ LLE++S+VAA
Sbjct: 126 LQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLVGDYTFGRNPQDIGLLEKLSNVAA 185

Query: 183 AAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLPRV 242
           AAHAPF++AA+P +F M SF+E+  PRDL K+FE+ +  +W+SFR+S+DSRYV L LP  
Sbjct: 186 AAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLVLPHF 245

Query: 243 IGRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIRGV 302
           + RLPYG  T+ V+  N+ E ++  ++ + YLW NAA+ L+ R+ EAF ++GWCAAIRG 
Sbjct: 246 LLRLPYGPDTLPVEGINYVEDVN-GSDHSKYLWGNAAWALSQRITEAFAKYGWCAAIRGA 304

Query: 303 EGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAFFA 362
           EGGG V+ LP + + + +G+  ++CPTEVAI+DRREKEL +LGFI L + K +D A FF 
Sbjct: 305 EGGGAVEGLPAHTFRTTSGDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAVFFG 364

Query: 363 VQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNFLQ 422
            Q+TNK + Y++  ANANA++S+ L Y++  SRFAHYLK I+RDKVGSFM++   Q +L 
Sbjct: 365 GQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQTYLN 424

Query: 423 NWINQYVVGSDNVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSMSLR 482
           NWI  YV+ +DN    IKA +PLREA V+V +V G PG YRA  +L+PHFQLE L+ S+R
Sbjct: 425 NWIADYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGVYRATVFLRPHFQLEELTASIR 484

Query: 483 LVAELPASTGA 493
           LVA LP    A
Sbjct: 485 LVATLPPPVAA 495