Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 497 a.a., EvpB family type VI secretion protein from Pseudomonas fluorescens FW300-N2E3

 Score =  464 bits (1193), Expect = e-135
 Identities = 241/497 (48%), Positives = 335/497 (67%), Gaps = 11/497 (2%)

Query: 2   SDIQVMNASAQAEQSGDYLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSNDL 61
           +D Q +  + +A +    L Q         RE+    V++  +  L++      +VSND 
Sbjct: 7   ADAQTLGTTEEASEFASLLLQEFKPKTDRAREAVETAVRTLAEQALAQTD----LVSNDA 62

Query: 62  VGSIEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQSSVT-ENTKVRVFNCTK 120
           + SIE+ IAAID  L++QV+++I  P+FQ++ES+WRGLH LV ++ + E  K+RV N +K
Sbjct: 63  IKSIESIIAAIDAKLTAQVNQVIHHPDFQQLESAWRGLHYLVNNTESDEQLKIRVLNISK 122

Query: 121 KEL---LRDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQI 177
            +L   L+ FK  + +DQS +FK +YE EYG FGG+PY   VGD+ FD  P DV+LL ++
Sbjct: 123 TDLHKTLKKFKGTA-WDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEL 181

Query: 178 SHVAAAAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGL 237
           S V AA H+PF++AA+P +  MGS+ E+  PRDL K+F T +YA W+S R+S+DSRY+GL
Sbjct: 182 SKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGL 241

Query: 238 TLPRVIGRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCA 297
           T+PR + RLPYGAKT  V+AF FEE  D   + + Y W NAAY +A  +  +F+  GWC+
Sbjct: 242 TMPRFLARLPYGAKTDPVEAFAFEENTD-GADSSKYTWANAAYAMAVNINRSFKHFGWCS 300

Query: 298 AIRGVEGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDY 357
            IRGVE GG V++LP + + +  G   M+CPTE+AISDRRE ELA+ GF+PL++ K TD+
Sbjct: 301 RIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDF 360

Query: 358 AAFFAVQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSEC 417
           AAF   QS  KP +YD   A ANA L+++L Y+  T RFAHYLK IVRDK+GSF  K E 
Sbjct: 361 AAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEM 420

Query: 418 QNFLQNWINQYVVGSD-NVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEG 476
           Q +LQ+WI  YV G   +   T KA HPL  A V V DV G+PG Y +  +L+PH+QLEG
Sbjct: 421 QRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEDVEGNPGYYTSKFFLRPHYQLEG 480

Query: 477 LSMSLRLVAELPASTGA 493
           L++SLRLV++LP++ GA
Sbjct: 481 LTVSLRLVSKLPSAKGA 497