Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  337 bits (865), Expect = 4e-97
 Identities = 176/476 (36%), Positives = 277/476 (58%), Gaps = 8/476 (1%)

Query: 17  GDYLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSNDLVGSIEARIAAIDELL 76
           G  LD+I+  T+    E   +  K  +  F+  +              ++  +  +D+ +
Sbjct: 17  GSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKI 76

Query: 77  SSQVSKIIQAPEFQRMESSWRGLHKLV-QSSVTENTKVRVFNCTKKELLRDFKSASDFDQ 135
           S+Q+ +I+   +FQ MES+WRGL   V ++   EN KV + + TK ELL DF+ A +  Q
Sbjct: 77  SAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQ 136

Query: 136 SSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHVAAAAHAPFLSAANPG 195
           S L+K +Y + YG FGG+P  A +G++ F     D++LL+ +  + A AHAPF+S+  P 
Sbjct: 137 SGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPE 196

Query: 196 MFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLPRVIGRLPYGAKTVSV 255
            F + SF E+P  +DL   FE+  Y +W+S R+S+D+RY+GLT PR + R+PY      V
Sbjct: 197 FFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPV 256

Query: 256 DAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIRGVEGGGLVKSLPTYN 315
            +FN+ E +  ++E   YLW N A+  A R+ ++F ++ WC  I G + GG V+ LP + 
Sbjct: 257 KSFNYAENVSASHE--HYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHV 314

Query: 316 YISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAFFAVQSTNKPRKY--- 372
           + S  G    + PTEV I+DR+E ELAE GFI L   KG+D AAFF+  S  KP+ +   
Sbjct: 315 FESM-GALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNT 373

Query: 373 -DSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNFLQNWINQYVVG 431
            + + A  N KL +QL Y+M  +R AHY+K + R+++G++  + + +  L +WI QYV  
Sbjct: 374 KEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVAD 433

Query: 432 SDNVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSMSLRLVAEL 487
            +N    +++  PLR A +EV+DV G+PG Y+    ++PHF+  G +  L LV  L
Sbjct: 434 QENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRL 489