Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 491 a.a., type VI secretion system contractile sheath large subunit from Pseudomonas fluorescens SBW25-INTG

 Score =  336 bits (862), Expect = 1e-96
 Identities = 174/428 (40%), Positives = 260/428 (60%), Gaps = 8/428 (1%)

Query: 65  IEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLV-QSSVTENTKVRVFNCTKKEL 123
           ++  IA ID  LS Q+ +I+  P+FQ +E+SW+GL  LV ++   EN K+ + N ++++L
Sbjct: 64  VDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTDFRENIKIELLNVSRQDL 123

Query: 124 LRDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHVAAA 183
           L DF+ + +  QS L+K IY +EYG FGG P  A + ++       DV+L++  S VA  
Sbjct: 124 LEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSVACM 183

Query: 184 AHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLPRVI 243
           AHAPF++AA P  F + SF+ +P  +DL   FE   +A+W+SFRQS+D+RY+GLT+PR +
Sbjct: 184 AHAPFIAAAAPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVPRFL 243

Query: 244 GRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIRGVE 303
            R PY      V  F ++E +  ++E   YLW N AY  A R+ ++F    WC  I G +
Sbjct: 244 LRTPYDPLECPVKTFAYQENVVNSHE--HYLWGNTAYAFATRLTDSFARFRWCPNIIGPQ 301

Query: 304 GGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAFFAV 363
            GG V+ LP +++ S  GE   + PTEV +SDRRE ELA+ GFI L   KG+D AAFF+ 
Sbjct: 302 SGGAVEDLPLHHFHSM-GEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA 360

Query: 364 QSTNKPRKY----DSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQN 419
            S  KP+ +    + + A  N +L +QL Y+M  +R AHYLK + R+++GS+  +++ + 
Sbjct: 361 SSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL 420

Query: 420 FLQNWINQYVVGSDNVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSM 479
            L  WI QYV   +N    ++   PLR A + V DV G PG YR    ++PHF+  G   
Sbjct: 421 ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADF 480

Query: 480 SLRLVAEL 487
           +L LV +L
Sbjct: 481 TLSLVGKL 488