Pairwise Alignments

Query, 368 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 373 a.a., ABC-2 type transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  138 bits (348), Expect = 2e-37
 Identities = 93/358 (25%), Positives = 181/358 (50%), Gaps = 18/358 (5%)

Query: 1   MYHRLWTLIRKELQSLLREPQTRTILILPVVLQVILFPFAATLEVTNATIAIYNQDNGSH 60
           M  R+W ++ KEL+ L R+  T  ++++  ++Q++LF +A   +  +    + N  + ++
Sbjct: 1   MLRRIWAVVVKELRQLSRDRMTFGMIVMIPLVQLMLFGYAINTDARHLPAGLVNLSDSAY 60

Query: 61  SVELTQRFAHAKA--FSHLLLLKSPQEIQPTLDKQKALL---------LIRFPADFSRNL 109
           S  L +     +   F H  L  +  +   T  + KA+L         L+R PA F+   
Sbjct: 61  SRALVKAVEATQVVDFKHRYLSAAEADAAITRGEVKAVLYLGADLDERLVRHPA-FAGQA 119

Query: 110 ASNQPAKLQIILDGRNSNSAQIAANYLQQIVKNYQLELMTGQPKSNNSELVIRNWYNPNL 169
              +P   Q ++DG ++    + A+ ++ + +    E+     KSN     +  ++NP  
Sbjct: 120 YFAEPVG-QWLVDGSDT----VVASTIRSLRQMPLDEIAGRAVKSNPPSFEVVQYFNPEQ 174

Query: 170 NYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPAQIV 229
                +VP L+ +I T+ +++ TS ++ REREQG ++ L+ +P+   ++ +GK  P  +V
Sbjct: 175 RSVVNIVPGLLGVILTMTMVMFTSAAIVREREQGNMEFLITTPVRPLELMLGKITPYVLV 234

Query: 230 AIAQATIVLGVGIWGYQIPFSGSVLLFYFTMLIYGLSLVGFGLLISALSSTQQQAFIGVF 289
              Q  I+L  G   + +P  G +       +++  + +  GL+IS ++ TQ Q+     
Sbjct: 235 GFVQLAIILSAGHLLFAVPIRGGLDSIALAAMLFICASLTLGLVISTIAKTQLQSMQMTV 294

Query: 290 VFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASL-DIVWGSLW 346
             ++P+ILLSG++ P E MPV  Q +    P  HF  +++ I L+DA + D+ + +LW
Sbjct: 295 FILLPSILLSGFMFPYEAMPVAAQWIAEALPATHFMRMSRAIVLRDAEVSDLQFDALW 352