Pairwise Alignments

Query, 562 a.a., sensor histidine kinase from Rahnella sp. WP5

Subject, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  643 bits (1658), Expect = 0.0
 Identities = 322/559 (57%), Positives = 432/559 (77%), Gaps = 8/559 (1%)

Query: 5   NLILLLLQQMCVFLVIAWLMSKTRLFIPLVQVSVRLPHKLLCYITFSIFCIMGTYFGLHI 64
           +LIL LLQQMCV+LV+A+++SKT +FIPL+ +S R  HK+  Y+ FS+FCIMGTYFGL I
Sbjct: 2   DLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQI 61

Query: 65  EDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGIHRYSMGGMTALSCMISTIAEGLLGGLV 124
            D+IANTRAIGAVMGGL GGPV+G  VGLTGG+HRY++GG T L+C IST AEGL+GGL+
Sbjct: 62  NDAIANTRAIGAVMGGLFGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLL 121

Query: 125 HSVLIKRGRIDKLFNPLVAAGVTFVAEILQMLIILLIARPFHDALNLVGSIAAPMMVTNT 184
           H+ L+++G+   LF+P +   VT  AEI+QMLIIL++A+PF  +  LV +IAAPM++ N+
Sbjct: 122 HTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIANS 181

Query: 185 LGAAMFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRRGFNEENSMKVAQVLLKELD 244
           +GAA+FM ILLD++ +FE+Y++ FS  AL +A  + GIL  GFN EN+ K+A+++ ++ +
Sbjct: 182 VGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQTN 241

Query: 245 IGAVAITDREKLLAFTGIGDDHHLVGKPISSQYTWRAIENDEVVYADGNEMPYRCSLHPS 304
           +GAV+ITDREK+LAF GIGDDHH    PISSQ T  AI  + ++Y DG E PY+CSL P+
Sbjct: 242 VGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSPT 301

Query: 305 CKLGSTLVIPLRGENQRVIGTIKLYEVRNRLFSSINRTLGEGIAQLLSAQILAGKFEQQK 364
           CKLGS L+IPLR    RVIGTIKLYE + +LFS+IN ++ +GIAQLLS+QIL G+++Q++
Sbjct: 302 CKLGSALIIPLRA-GDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQ 360

Query: 365 ALLAQSEIKLLHAQVNPHFLFNALNTLMAVIRHDSDKAGQLVQYLSTFFRKNLKRSSEVV 424
            LL+++EIKLL AQVNPHFLFNALNT+ AVIR + DKA +L+ +LS FFR NLK++ E V
Sbjct: 361 ILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVETV 420

Query: 425 TLADELEHVNAYLQIELARFPSQLKVDLQVPEAFSDQSLPAFTLQPLVENAIKHGTSQLL 484
           TL +EL HVNAYL IE ARF  +L V++ + +A  ++++P+FTLQPLVENAIKHGTS LL
Sbjct: 421 TLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL 480

Query: 485 SNGNIVIRAYS---EGEMVIIEVEDNAGLYQ-PEESSDGLGMSLVDKRLRARFGDDYGIT 540
             G   +R YS   EG M ++ VEDNAGLYQ P E  DGLGM +V+KRL  +FG   G+ 
Sbjct: 481 EAGK--VRIYSEVVEGGMRVV-VEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQ 537

Query: 541 VSCKPDDFTRVTLRLPAEG 559
           +   P ++TR++  +P +G
Sbjct: 538 IEVAPQEYTRMSFVIPQQG 556