Pairwise Alignments

Query, 562 a.a., sensor histidine kinase from Rahnella sp. WP5

Subject, 576 a.a., Signal Transduction Histidine Kinase (STHK), LytS (NCBI) from Rhodospirillum rubrum S1H

 Score =  716 bits (1849), Expect = 0.0
 Identities = 360/556 (64%), Positives = 442/556 (79%)

Query: 6   LILLLLQQMCVFLVIAWLMSKTRLFIPLVQVSVRLPHKLLCYITFSIFCIMGTYFGLHIE 65
           L++ L QQMCV+LV+A+L+SKT LFIPLV V++RLPHK  CY  FS+FCIMGTYFGL I+
Sbjct: 8   LVISLSQQMCVYLVVAYLLSKTPLFIPLVHVTIRLPHKAACYAIFSLFCIMGTYFGLRID 67

Query: 66  DSIANTRAIGAVMGGLLGGPVVGGLVGLTGGIHRYSMGGMTALSCMISTIAEGLLGGLVH 125
           DSIANTRAIGAV+GG+LGGP VG  VGLTGG+HRYSMGG TAL+C IST AEGL+GGLVH
Sbjct: 68  DSIANTRAIGAVLGGMLGGPSVGLAVGLTGGLHRYSMGGFTALACAISTTAEGLIGGLVH 127

Query: 126 SVLIKRGRIDKLFNPLVAAGVTFVAEILQMLIILLIARPFHDALNLVGSIAAPMMVTNTL 185
             L+ RG+  KLF PLV   VT  AE+ QMLII+L+ARP  +A++LV +IA PM+V N++
Sbjct: 128 RYLVSRGQTGKLFQPLVVGLVTLFAEVCQMLIIILVARPAVNAVHLVETIALPMLVANSV 187

Query: 186 GAAMFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRRGFNEENSMKVAQVLLKELDI 245
           GAAMFM ILLD+R MFE  +S FSA ALK+AA  EG LR GFN ENSM+VA+++ +E  +
Sbjct: 188 GAAMFMTILLDRRTMFETQSSVFSAKALKIAARAEGALRSGFNRENSMRVARIIYEETGV 247

Query: 246 GAVAITDREKLLAFTGIGDDHHLVGKPISSQYTWRAIENDEVVYADGNEMPYRCSLHPSC 305
           GAVAITDR+K+LAF GIGDDHH  G  ++S  T  +I  + V+YADGNE+ Y+CS+ P+C
Sbjct: 248 GAVAITDRDKILAFIGIGDDHHKPGMAVTSLQTLESIRENRVMYADGNEVAYQCSISPTC 307

Query: 306 KLGSTLVIPLRGENQRVIGTIKLYEVRNRLFSSINRTLGEGIAQLLSAQILAGKFEQQKA 365
            LG+ LVIPL  E ++VIGTIKLYE + RLFS+INRTLGEG+A+LLS QILAG++EQQ+ 
Sbjct: 308 PLGAALVIPLVDEGEQVIGTIKLYEPKTRLFSTINRTLGEGVARLLSTQILAGRYEQQRQ 367

Query: 366 LLAQSEIKLLHAQVNPHFLFNALNTLMAVIRHDSDKAGQLVQYLSTFFRKNLKRSSEVVT 425
           LLAQSEIKLLHAQVNPHFLFNALNTL AVIR D D A  LVQ LSTFFRKNLKR+SE VT
Sbjct: 368 LLAQSEIKLLHAQVNPHFLFNALNTLSAVIRLDPDHARHLVQSLSTFFRKNLKRTSEQVT 427

Query: 426 LADELEHVNAYLQIELARFPSQLKVDLQVPEAFSDQSLPAFTLQPLVENAIKHGTSQLLS 485
           L DE+E V+AYL+IELARF  +L VD  VP      +LP F+LQPLVENAIKHGT+QLL 
Sbjct: 428 LNDEVEQVSAYLEIELARFGDRLSVDFNVPADLGTATLPTFSLQPLVENAIKHGTAQLLG 487

Query: 486 NGNIVIRAYSEGEMVIIEVEDNAGLYQPEESSDGLGMSLVDKRLRARFGDDYGITVSCKP 545
           +G I + A  +G  +++ VEDNAGLY+     DGLGM+LVD+R+RAR+G  YG++V C+ 
Sbjct: 488 DGRIGVSAERQGGDLVVRVEDNAGLYERRPGGDGLGMNLVDRRIRARYGQGYGLSVECER 547

Query: 546 DDFTRVTLRLPAEGAP 561
           D  TRV LR+P + +P
Sbjct: 548 DVVTRVILRVPFDPSP 563