Pairwise Alignments

Query, 352 a.a., polysaccharide deacetylase family protein from Rhodopseudomonas palustris CGA009

Subject, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 66/272 (24%), Positives = 105/272 (38%), Gaps = 74/272 (27%)

Query: 35  IFMLHSVRPARDDSFQPNRHLEVTPDFLRATLRHLRELGIDLVPMDELHRR--LRARDFS 92
           I M H  R  RDDS +      +    L    + L+++G + +   +L  +  +      
Sbjct: 349 IIMYH--RFIRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPG 406

Query: 93  RRFACITLDDGYRDNRDFALPVFEEFGAPFTVFVTSDFAEGTGRLWWVTLERLIAAQSRL 152
           +RF  IT+DDGYRDN D  LP+ +++     V+V             VT E      +R 
Sbjct: 407 KRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYV-------------VTGENF----NRW 449

Query: 153 DVSI-EGQELRLDIATPEAKQAAFDRLHDLLRSLPNGGDLDAAMTALCLRYGVDETAAAR 211
           DV + +  E  + + +PE  +A    LHD                               
Sbjct: 450 DVEVSDNPEKVVPLMSPEQVKA----LHD------------------------------- 474

Query: 212 ELCLPWNELRNFAAHPLVTIGAHGITHCMLRRQTELVAAHELTGSRARIQDELQRPVDHL 271
                           LV IG H +TH  L + +E     E+  ++  ++  +  P+   
Sbjct: 475 --------------SGLVEIGGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSF 520

Query: 272 AYPYGDRASAGPREFAIAQAVGYKTAVTTRPG 303
           AYPYGD  +   +   +AQ +GY  AV T  G
Sbjct: 521 AYPYGDHDATSKQ---LAQDLGYPFAVATNSG 549