Pairwise Alignments

Query, 597 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  165 bits (418), Expect = 2e-45
 Identities = 86/240 (35%), Positives = 137/240 (57%)

Query: 344 VRVMGGVVVAVLILPIVVVMVISFSSASYLTFPPPGFSLRWYEQFFSDTNWMRAFWTSAL 403
           +R +  ++ A +  P+ +V+ +SFSSA+ L FPPPG++L+ Y  FFSD NW +    S L
Sbjct: 5   IRSLAILIAAFVAAPMFIVIPMSFSSAASLAFPPPGYTLQNYVNFFSDPNWTQPLTNSLL 64

Query: 404 IALVSAVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPIIVPPVVLGLSLYTLFLKFDLI 463
           I   +  + + +   A+  +VR    G++   LL++ P+IVP +V+ L  Y  F +  L+
Sbjct: 65  IGFGTVCVTMLVAVPASFALVRHVFIGRTVFNLLIMLPMIVPTIVMALGYYIYFGQLRLV 124

Query: 464 GSVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQAAAVHGASSLTVLRLVTLPAIAPGL 523
            S  G+  AH+   LP+  +IL AAL+G D+ +E+AA   GAS     RL+T P + P  
Sbjct: 125 QSYLGVILAHSCIALPMSTLILTAALKGFDRSVERAAMNLGASPFATFRLITFPILRPAF 184

Query: 524 AAATFFAFLHSFDELVLTLFLSSAQLKTLPLMLWGDINYRLNPVLAVVSTLEVLLVVGGL 583
             A  FAF+ SFDE V+ LF+S     TLP  ++  +    +P ++  S+   LLV+ G+
Sbjct: 185 TVAGLFAFIASFDEAVIALFISGRDKATLPRQMFNAVRQEADPTISAASSFLFLLVLAGV 244



 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 32/270 (11%)

Query: 18  LAMKLKNPALLLLPAVAFLGFIYLLPLIDLIRISISGPS---WLTYFQRVFAVPLYWESL 74
           +++ +++ A+L+   VA   FI ++P+      S++ P     L  +   F+ P + + L
Sbjct: 1   MSVWIRSLAILIAAFVAAPMFI-VIPMSFSSAASLAFPPPGYTLQNYVNFFSDPNWTQPL 59

Query: 75  VRTMQISVTVAFLCLLFGYPTALLIHRTQGLTRALIATAIVLPYFIAILIRTYAWMVLLG 134
             ++ I      + +L   P +  + R   + R +    I+LP  +  ++    + +  G
Sbjct: 60  TNSLLIGFGTVCVTMLVAVPASFALVRHVFIGRTVFNLLIMLPMIVPTIVMALGYYIYFG 119

Query: 135 RTGPVNKLLVAIGILGEPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLTRAAL 194
           +   V   L                  V+L  + + LP+  L + +++   D  + RAA+
Sbjct: 120 QLRLVQSYL-----------------GVILAHSCIALPMSTLILTAALKGFDRSVERAAM 162

Query: 195 ASGAGPIAVFWRVLLPLTLPGIGAGFLLVFVAAIGFFITPTLLGGPGD-----QMFAMHI 249
             GA P A F  +  P+  P      L  F+A+    +    + G        QMF   +
Sbjct: 163 NLGASPFATFRLITFPILRPAFTVAGLFAFIASFDEAVIALFISGRDKATLPRQMFNA-V 221

Query: 250 TQQADSVTSEGFLQALGVVLLLITLAVVAI 279
            Q+AD   S     A    L L+ LA V I
Sbjct: 222 RQEADPTIS-----AASSFLFLLVLAGVCI 246