Pairwise Alignments

Query, 521 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

Subject, 510 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  275 bits (704), Expect = 2e-78
 Identities = 166/488 (34%), Positives = 267/488 (54%), Gaps = 22/488 (4%)

Query: 22  LTKRFGSFVANQAIDLDIAGGEVHALLGENGAGKSTLVKLITGLLQPDDGRMIWRGTPIS 81
           +TK F    A   + L +  G+V AL+GENGAGKST+VK++TG+ QPD GR++  G P+ 
Sbjct: 26  ITKTFPGVKALSDVSLSLYPGKVTALIGENGAGKSTVVKILTGIYQPDGGRILVDGQPVP 85

Query: 82  FAGPAEARACGIAAVSQHFALFDNLTVVENVALGLDRRISVG-----RLATELEQISQRY 136
           F+ P  A   G+ A+ Q   LFD L+V EN+ LG   R + G     +       +    
Sbjct: 86  FSTPQAAADHGVTAIHQETVLFDELSVAENIFLGHAPRGAFGLIDWKKTTENARALLTSI 145

Query: 137 GLPLDPKREVWRLSVGERQRIEIVRALLQNPQLLILDEPTAVLTPAEADRLFDVLQRLRA 196
           G  LDP  ++  L +  +  + I RAL    +++I+DEPTA L+  E + L+++++ L+A
Sbjct: 146 GAELDPDHKLKDLGIANKHLVAIARALSIEARVVIMDEPTAALSHKEIEELYELVESLKA 205

Query: 197 DGRALLYISHKLDEVKRLASVATILRAGRVVGSCDPRQESAASMARMMVGSDVTAP-KQS 255
            G+A+L+ISHK DE+ R+A   T+ R G+++G       + A + +MMVG DV+    Q 
Sbjct: 206 QGKAILFISHKFDEIFRIADNYTVFRDGQLIGDGAIADVTEADLVKMMVGRDVSQIFPQR 265

Query: 256 SHSIGGPLLSVSGLTQRPDDPHGVTLRDIALEVRSGEIVGIAGVAGNGQDELFAALSGET 315
           + ++G  +L+V G        H     DI+  +R GEI+G  G+ G G+ E   +L G T
Sbjct: 266 APNVGDTVLTVQGYA------HPTEFDDISFTLREGEILGFYGLVGAGRSEFMQSLFGIT 319

Query: 316 -PIAQSDVIHIAGEAAGSLSINQRRRLGAAFVPEQRLGHATVPTMSLSDNALLTGHATGA 374
            P A S  + I G  A   S       G  +VPE R     +  + +  N  L   + G 
Sbjct: 320 RPSAGS--VEIGGARAEISSPADAVDHGIVYVPEDRGKQGAILDLPIFQNVTLP--SLGR 375

Query: 375 LVKFGLVNRGAALALVDRVSEAFDVRKASRDPEAARLSGGNLQKFIVGREILRQPRLLIV 434
           + + G +      AL    +E  D+R AS D     LSGGN QK ++ + +  +PR++I+
Sbjct: 376 ISRKGFLRLAEEFALAREYTERLDLRAASLDTHVGNLSGGNQQKVVIAKWLATRPRVIIL 435

Query: 435 DQPSWGLDAGAASAIRQALLDLAASGAAVLVISQDLDELIEIADRIAVMFHGRLSPPRPV 494
           D+P+ G+D G+ +A+   + +LAA G AV+++S ++ E++ ++DR+ VM  GR+     V
Sbjct: 436 DEPTKGVDIGSKAAVHDFMAELAAQGLAVIMVSSEIPEVLGMSDRVIVMREGRI-----V 490

Query: 495 SEIGRDQL 502
           +E+  D L
Sbjct: 491 AELAGDDL 498



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 20/234 (8%)

Query: 281 LRDIALEVRSGEIVGIAGVAGNGQDELFAALSGETPIAQSDV--IHIAGEAAGSLSINQR 338
           L D++L +  G++  + G  G G+  +   L+G   I Q D   I + G+     +    
Sbjct: 36  LSDVSLSLYPGKVTALIGENGAGKSTVVKILTG---IYQPDGGRILVDGQPVPFSTPQAA 92

Query: 339 RRLGAAFVPEQRLGHATVPTMSLSDNALLTGHATGALVKFGLVN----RGAALALVDRVS 394
              G   + ++ +       +S+++N  L GHA      FGL++       A AL+  + 
Sbjct: 93  ADHGVTAIHQETV---LFDELSVAENIFL-GHAPRGA--FGLIDWKKTTENARALLTSIG 146

Query: 395 EAFDVRKASRDPEAARLSGGNLQKFIVGREILRQPRLLIVDQPSWGLDAGAASAIRQALL 454
              D     +D     L   N     + R +  + R++I+D+P+  L       + + + 
Sbjct: 147 AELDPDHKLKD-----LGIANKHLVAIARALSIEARVVIMDEPTAALSHKEIEELYELVE 201

Query: 455 DLAASGAAVLVISQDLDELIEIADRIAVMFHGRLSPPRPVSEIGRDQLGLLMGG 508
            L A G A+L IS   DE+  IAD   V   G+L     ++++    L  +M G
Sbjct: 202 SLKAQGKAILFISHKFDEIFRIADNYTVFRDGQLIGDGAIADVTEADLVKMMVG 255