Pairwise Alignments

Query, 429 a.a., TRAP transporter large permease from Rhodopseudomonas palustris CGA009

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  207 bits (527), Expect = 5e-58
 Identities = 122/428 (28%), Positives = 214/428 (50%), Gaps = 11/428 (2%)

Query: 5   IVLGLLFVLLAIGTPVGFAMAFSGSVGLLMVGGTGTLFGILETAPLSTVSSYELITIPMF 64
           +V+     L  +G PV +A+     + +L+    G  FG+L       + S+ L+ +P+F
Sbjct: 4   LVVAAFLGLFMLGFPVVYAILLPSILYVLV---EGLPFGLLAQRITYALDSFPLVAVPLF 60

Query: 65  LLMAELVLLSGVADALFKTASAWVGRIPGGLGMATALAGAGFGAICGTSTASAATLSSTS 124
           + +  L+ LSG+ D +F+ A   VGR+PGGL          F  + G + A    L    
Sbjct: 61  IFVGNLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGRIE 120

Query: 125 LPAMIKQGYEPKMAAGVVAISGTLAMLIPPSVALVIFGLLAEVNIGQLLIGGIIPAALVT 184
           + AM K+G++P  A  V A S TL  + PPS+ L+++G +  V+I QLL+ GI+PA L T
Sbjct: 121 IDAMKKRGFDPSFAGAVTAASATLGPIFPPSIPLIVYGSVTSVSIVQLLVAGIMPAVLCT 180

Query: 185 ATIMATIYILVWLDPSRAPRVASVPWRERFVLLWQIGPMLALF---SLVTGTIYLGVATP 241
           A +M T+ I+      R     +  W     L+  + P L      +L+ G +  G  TP
Sbjct: 181 ALLMLTVLIVA----IRHGHARAERWPTAGELVGTLVPALPAILAPALMVGGMTAGAFTP 236

Query: 242 TEASALGAAGALVLA-ISKGKVTPRTLYKALLSASYGTCMIVTILVGASIFGYFFTLTHV 300
           TEA+A+ A   + ++ +   ++TP  L+ + +  +  +  I+ I+  A++FG+   +  V
Sbjct: 237 TEAAAITAVYVIFISGVLYRELTPAHLWHSAVLTARSSSAILIIVASAALFGWILAVEQV 296

Query: 301 TQDLVAWVGSLETSRWVIITLILCGYIVLGSFMDQIAILVLTVPIVMPLIKSLGFDPIWF 360
            Q   A +        +++ +    + V G F+D     +L VPI+ P +   G DP+  
Sbjct: 297 PQTFAAALLGWSKDPLMLLIIANLIFFVAGMFLDSTTATLLLVPIIAPPLVMAGVDPVQL 356

Query: 361 GVIKIVTAEVGMITPPVGLNCFIVARYAKRPVAEVFHGTFPHFIAHLIAIAIMVAFPSII 420
           G++ I    +G++TPP+GL+ F+V+  AK  + ++     P +I  +  + I+       
Sbjct: 357 GIVTIFNLMLGLLTPPMGLSLFLVSDIAKVSIRQLLRALVPFYIPLVSTLVILTLAKDFT 416

Query: 421 LWLPSQMA 428
           LWLP  +A
Sbjct: 417 LWLPRLIA 424