Pairwise Alignments

Query, 320 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Rhodopseudomonas palustris CGA009

Subject, 314 a.a., (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) from Pseudomonas stutzeri RCH2

 Score =  316 bits (810), Expect = 4e-91
 Identities = 166/312 (53%), Positives = 217/312 (69%), Gaps = 5/312 (1%)

Query: 7   LKIVLCSPRGFCAGVVRAIDTVERALALYGAPVYVRHEIVHNKYVVDSLRAKGAIFVEEL 66
           ++I L +PRGFCAGV RAI+ V RAL ++G P+YVRHE+VHNK+VV+ LRA+GAIFVEEL
Sbjct: 1   MQIKLANPRGFCAGVDRAIEIVNRALEVFGPPIYVRHEVVHNKFVVEDLRARGAIFVEEL 60

Query: 67  EEIPDTKAPVVFSAHGVPKSVPEHALSRNFFSIDATCPLVTKVHREAAIHFKRGREILLI 126
           +++PD    V+FSAHGV ++V + A  R     DATCPLVTKVH E A + + GRE +LI
Sbjct: 61  DQVPDNVI-VIFSAHGVSQAVRQEAEKRGLKVFDATCPLVTKVHLEVAKYSREGRECILI 119

Query: 127 GHSHHPEVVGTLGQLPA---GAVTLIETAADAEAYQPKDPNNLAFVTQTTLSIDDTAGIV 183
           GH  HPEV GT+GQ  A   GA+ L+E   D    Q ++P  LAFVTQTTLS+DDT+ ++
Sbjct: 120 GHQGHPEVEGTMGQYNARNGGAIYLVEDEEDVAQLQVRNPEALAFVTQTTLSMDDTSRVI 179

Query: 184 TVLRERFPNISGPHKEDICYATTNRQAAVKKVAPVVDAMIVVGAPNSSNSQRLREVAERE 243
             LR +FP+I GP K+DICYAT NRQ AVK++A   D ++VVG+PNSSNS RLRE+AER 
Sbjct: 180 DALRSKFPSIGGPRKDDICYATQNRQDAVKQLADECDVVLVVGSPNSSNSNRLRELAERM 239

Query: 244 GCKVAVLVQRASDLDWSQFEGIKVLGLTAGASAPEVIVEEIMGAFAERFDLSVETVSAAE 303
               A L+  A DL    FE I+ +G+TAGASAPEV+V  ++    E     ++ +    
Sbjct: 240 NTP-AYLIDGAEDLKREWFENIERIGITAGASAPEVLVRGVIEQLKEWGATGMDELEGRP 298

Query: 304 ENEFFPVPRVLR 315
           EN  F +P+ LR
Sbjct: 299 ENVTFSMPKELR 310