Pairwise Alignments

Query, 454 a.a., proton-conducting transporter membrane subunit from Rhodopseudomonas palustris CGA009

Subject, 487 a.a., Proton-translocating NADH-quinone oxidoreductase, chain N (NCBI) from Rhodospirillum rubrum S1H

 Score =  200 bits (509), Expect = 7e-56
 Identities = 146/462 (31%), Positives = 229/462 (49%), Gaps = 36/462 (7%)

Query: 11  PLVVLAIAAVAAMMLVPLARLQ---IVQASAAAGLAIAAALVLLRIGAPAAPM---GALF 64
           P ++LA+  +  +M+    +     +V   A  GL +A A+V L   AP  P    G LF
Sbjct: 13  PEILLAVLGLVLLMVGVFRKTDSTGLVGLLAVYGLLMALAVVGLG-AAPETPQLAFGGLF 71

Query: 65  TDDGPARFG----IVFACLVSLGALVFLRTGHPAK-EAPSLLVLVAIGAATLAGAGHAAT 119
            DDG AR+     ++ A L  L ++V+L+  +  + E P L++   IG   +  A     
Sbjct: 72  IDDGFARYAKALTLLGAVLTLLLSMVWLKRENEGRFEFPILVLFATIGMMMMISANDLIA 131

Query: 120 LFLGIEILSLSLIALFAF-RLTRQGLEAAYKFLVMSGLASSALLLGIALIFAETGALDFA 178
           L++G+E+ SL+L  + A+ R   +  EA  K+ V+  LAS  LL G++L++   G   F 
Sbjct: 132 LYMGLELQSLALYVIAAYQRDNLKSTEAGLKYFVLGALASGLLLYGMSLVYGFAGTTRFD 191

Query: 179 GW-------GGRGALTAFGTALLLAGLAFKFSLVPFHMWTPDAFEAAPASAATLAGVVSK 231
           G        GG       G   ++AGLAFK S VPFHMW PD +E AP        V  K
Sbjct: 192 GLAQVAAAEGGISTGLLIGIVFIIAGLAFKVSAVPFHMWAPDVYEGAPTPVTAFFAVAPK 251

Query: 232 SAVAIVILRLAL---TAHLPEPVWSQGLAALGGASVLIGNLLALRQPQLPRMLGYSTIAH 288
            A   +  R+ +    A+  +  W Q +  +   S+L+G   A+ Q  + R++ YS+I H
Sbjct: 252 IAALTLFARVMMGPFAAYADQ--WQQVIILISILSMLLGGFAAIVQTNIKRLMAYSSIGH 309

Query: 289 SGYIALIIASGTPHAGEAVLFYLAIYAPAMLGALCVSAAL---GRA-PTLPDLHGLMKRR 344
            GY  + IA+GT      VL YLAIY    +G   V  A+   GRA   + DL GL K+ 
Sbjct: 310 VGYALIGIAAGTTEGVRGVLVYLAIYLFMNVGTFTVILAMRQKGRAVEGINDLAGLSKQH 369

Query: 345 PLEAIALSLSLLSLAGLPAAGGFIAKLFLLRVLIDGSLWVLVGIVVAGSSLGFFYYAKFF 404
           P+ A A+++ + S+AG+P   GF  K ++    ++  L+ L  I V  S +  FYY +  
Sbjct: 370 PMMAAAMAVFMFSMAGVPPLAGFFGKFYVFMAAVNSGLFALAVIGVLSSVVAAFYYLRII 429

Query: 405 TAPFVGHTHDESEPLPQLD----RGLLIVCIALIVIFGVAPA 442
              +     + +EPL  L     + +LI   A++ +F +AP+
Sbjct: 430 KLMYF---DEATEPLDALSGTTMKVILIGTAAVVALFFLAPS 468