Pairwise Alignments

Query, 327 a.a., GDP-mannose 4,6-dehydratase from Rhodopseudomonas palustris CGA009

Subject, 372 a.a., GDP-mannose 4,6-dehydratase Gmd from Phaeobacter inhibens DSM 17395

 Score = 56.6 bits (135), Expect = 9e-13
 Identities = 78/353 (22%), Positives = 135/353 (38%), Gaps = 51/353 (14%)

Query: 9   RLLITGATGFVGLHLAAAI-----------RRTFGAGTEIIPTALY-AGKDPALGEVMAL 56
           + LITG TG  G +LA  +           RR     T+ +         D A  ++   
Sbjct: 3   KALITGVTGQDGSYLAEFLLEKGYEVHGLKRRASSFNTQRVDHIYQDPHTDHARFKLHYG 62

Query: 57  DVTDPSAVATMIAKLQPSHVVNLAALAAPSAANADPSASWRVHLDGPRNIGRAI--LQAA 114
           D+TD S +  ++++++P  V NL A +  + +   P  +  V   G   +  AI  L   
Sbjct: 63  DLTDTSNLTRLLSEIEPDEVYNLGAQSHVAVSFEAPEYTADVDGIGTLRLLEAIRFLGLE 122

Query: 115 PACVLLHVGSGLAYGKNRPPICPTSEDRVLAPTDEYGASKAAAD-VALGPLIAKGLHCIR 173
                    +   YG  +    P  E     P   Y  +K  +  + +    A G++   
Sbjct: 123 KKTRFYQASTSELYGLVQET--PQRETTPFYPRSPYAVAKLYSYWITVNYREAYGIYACN 180

Query: 174 LRPFNHTGPGQTDAFVVPAFARQIARIEAGLAPPQMQVGNLDGQRDF------------- 220
              FNH  P + + FV     R +A I  GL    + +GN+D  RD+             
Sbjct: 181 GILFNHESPRRGETFVTRKITRGLANIAQGLEDC-LYMGNIDALRDWGHAKDYVRMQWMM 239

Query: 221 ----------------LDVRDVVAAYAETIARSDSLTPDAILNIASGVPRRIGDMLQQLL 264
                             VR  +   A+ +  S + + + +  IA+ V    GDM   L 
Sbjct: 240 LQQEAPEDFVIATGKQYSVRQFITWSAQELGLSLAFSGEGVEEIAT-VTAIEGDMAPALK 298

Query: 265 TMARVPIAVQNDPARGKSDAADVILGDASRARSMLNWQPTIAFEQTLADVLED 317
                 + ++ DP   +    + +LGD S+A+  L W+P I  E+  A+++ +
Sbjct: 299 VG---DVVLRIDPRYFRPAEVETLLGDPSKAKEKLGWEPEITTEEMCAEMVRE 348