Pairwise Alignments

Query, 279 a.a., AraC family transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 296 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  170 bits (430), Expect = 4e-47
 Identities = 104/269 (38%), Positives = 148/269 (55%), Gaps = 6/269 (2%)

Query: 13  RLDLASGVLQQPDGDWVDEQLHHGTKVVVILRGAMRALIDGCGSEFSIAGPTVCVIRAPA 72
           ++ L +G       DW +E L  G +++++  G +R  + G   E  I GP +C I    
Sbjct: 30  QMTLMAGTYCSDTEDWYEEPLERGVRLILVQSGRLRCRVPG-QPEHLIEGPMLCTIANAG 88

Query: 73  DASGRQMITADEPLHYVMVKAAFEPGSEADRE--RDPLAPLFCTDRPSLQHIEAPRALQA 130
           D +  Q+     PL Y M++  F+   E       D L P    D P +    A +A+QA
Sbjct: 89  DFTSAQVYDTARPLRYTMLQL-FDDDLEGRLGWLPDSLRPRRGED-PLMISCPATKAIQA 146

Query: 131 LCTQLEVCPFVGAARDLFLSAKAIEILALACDAVETNIATETLRP-SLGDVERLKKARAI 189
           L +Q+  C   G  RD +L  KA+E+ AL+   +    AT +    +  +VER+  ARAI
Sbjct: 147 LASQIATCQMDGPIRDFYLGGKALELAALSVQTLSGAPATGSDESITSAEVERIHAARAI 206

Query: 190 LLERLGAPPNLPALAAAVGMNPRKLTDGFQAAFGTTVNDFLQDARLNEAYRLLSSGATNV 249
           L+E L  PP L  LA  VGMN RKLT GF+  FGT+V  +LQ+ RL EA+R+L     NV
Sbjct: 207 LVEALREPPTLDQLALRVGMNRRKLTLGFRKVFGTSVFCYLQEYRLREAHRMLCDEEANV 266

Query: 250 SEAAHRVGYTPAYFSAVFRKRFGISPRDL 278
           S  AH VGY+PA+F+  FRKR+G+SPRD+
Sbjct: 267 STVAHLVGYSPAHFATAFRKRYGLSPRDI 295