Pairwise Alignments

Query, 386 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 430 a.a., nitrate binding protein nrtA from Caulobacter crescentus NA1000

 Score =  176 bits (447), Expect = 9e-49
 Identities = 113/392 (28%), Positives = 183/392 (46%), Gaps = 20/392 (5%)

Query: 4   RLRIGFIPLVDAAALIVAADKGFCAAEGL-DVELVREISWANVRDKFNIGL----FDAAH 58
           + R+GFI L D++ LI+A ++G  A  G+ D+E+V++ SWA  RD   +G      D AH
Sbjct: 48  KARLGFIALTDSSPLIIAKERGLFAKYGMPDIEVVKQASWAATRDNLVLGAERGGIDGAH 107

Query: 59  LLAPLAVASSLGI--GHVKVPVISGFGLGVNGNAITVSPDLHAAIVAMADGDVADPLVSG 116
           +L P+    + G   G    P+     L  NG  I+V  DL +  V +         +  
Sbjct: 108 ILTPMPYLMTTGTITGGAPTPMYILARLNTNGQGISVGNDLKSVKVGLNSAGAKAKFLQM 167

Query: 117 RALARVVAERRAKGQEPLTFGMTFPFSSHNYDLRFWMGAGGVDPDEDVRLVVLPPPFMVE 176
           +A   +               MTF   +H+  +R+W+ AGG++PD DV  +V+PPP MV 
Sbjct: 168 KAAGNIAK-----------VAMTFRGGTHDLWIRYWLAAGGINPDVDVSTIVIPPPQMVA 216

Query: 177 SLASKHLDGFCVGAPWNSVAIDLGIGTILHFTSELFQRAAEKMLTVRANWAAQHPEVLKA 236
           ++ +   D FCVG PWN   ++  +G     TSEL+    EK L +RA+W  ++P   +A
Sbjct: 217 NMKAGTQDAFCVGEPWNGQLVNQKVGYTACLTSELWMNHPEKALGMRASWVDRYPRAAQA 276

Query: 237 LIRAHARAADYIEDVANRDEVCALLTAPGRIEVAPELIRRTLDGRLKVAADGTLRTSDRY 296
           +  A   A  + +  AN  ++C++++    + V    I   L G +      TL+ S   
Sbjct: 277 ITAAVQEAQMWCDKAANLPQMCSIVSGRQYVNVPMGDILPRLQGTVDYGDGRTLKNSPHR 336

Query: 297 LLVGRGAAARPDPVQGAWNYAQMVRWGQAPLSADLLAAAKAVFRPDLYDAAV-GTAPALP 355
           +      A+ P      W   + +RWG  P   +  A    V R D++ AA      + P
Sbjct: 337 MKFWADNASFPFKSHDLWFLTEDIRWGVLPQKTNTKALVDKVNRSDIWRAAAKSIGQSGP 396

Query: 356 SAPADGIGE-CTGAPFDPDDIAGYLARMTIRR 386
           +  + G+     G  FDP +   YLA   I++
Sbjct: 397 AGDSRGVERFFDGKVFDPANPGAYLASQPIKK 428