Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1230 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase from Pseudomonas stutzeri RCH2

 Score = 1536 bits (3976), Expect = 0.0
 Identities = 769/1240 (62%), Positives = 966/1240 (77%), Gaps = 18/1240 (1%)

Query: 5    ISAKRTQLLALAA---QRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLI 61
            +S + ++L AL     +RIL+LDG MGTMIQ  +L+E  +RG RF D+ +D++GNNDLL+
Sbjct: 1    MSTRSSRLQALQQALKERILILDGGMGTMIQSYKLEEEDYRGTRFADWPQDVKGNNDLLL 60

Query: 62   LTQPQAIEDIHAQYLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAA-A 120
            L++P  I+ I   YL AGADI+ TNTF++T ++QADY M EL YE++ +GARLAR  A A
Sbjct: 61   LSRPDIIQAIEKAYLDAGADILETNTFNATRVSQADYGMEELVYELNVEGARLAREVADA 120

Query: 121  KVEAEDGKPRFVAGAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADI 180
            K      +PRFVAG +GPT+RT SISPDV NPGYR VTFD L   Y E   GL++GGAD+
Sbjct: 121  KTAETPDRPRFVAGVLGPTSRTCSISPDVNNPGYRNVTFDLLVENYVEATRGLIEGGADL 180

Query: 181  LLLETIFDTLNAKAALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRH 240
            +L+ETIFDTLNAKAA++A+ ++ E  G+++P+MISGTITD SGR LSGQ  EAFWNSVRH
Sbjct: 181  ILIETIFDTLNAKAAIFAVQQVFEDEGVELPIMISGTITDASGRTLSGQTTEAFWNSVRH 240

Query: 241  ARPITIGFNCALGAKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGE 300
            A+PI++G NCALGAKDLR ++ ++S  A+T V A+PNAGLPN FG+YDESP  MA++V E
Sbjct: 241  AKPISVGLNCALGAKDLRPYLEELSSKAETFVSAHPNAGLPNAFGEYDESPAEMAAVVEE 300

Query: 301  FAEAGLVNIVGGCCGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFV 360
            FA +G +NI+GGCCGTTPAHI+AIAEAV+ + PR IP I    RLSGLEPF + +   FV
Sbjct: 301  FAASGFLNIIGGCCGTTPAHIQAIAEAVSKYPPRAIPDIPKACRLSGLEPFTIDRSSLFV 360

Query: 361  NVGERTNVTGSAKFRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFL 420
            NVGERTN+TGSAKF +LI   +Y  AL+VA  QVE GAQ+ID+NMDEG+LDS+AAM+TFL
Sbjct: 361  NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSKAAMVTFL 420

Query: 421  NLVAAEPDIAKVPVMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHG 480
            NL+A EPDI++VP+M+DSSK+ VIEAGLKC+QGK +VNSIS+KEG ++F  +A + +R+G
Sbjct: 421  NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKQQAHLCKRYG 480

Query: 481  AAVVVMAFDETGQADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNN 540
            AAVVVMAFDE GQADT ARK EIC R+YDILVN VGFPPEDIIFDPNIFAIATG+EEHNN
Sbjct: 481  AAVVVMAFDEAGQADTAARKREICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNN 540

Query: 541  YGVDFIEATRWIRQNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIV 600
            Y VDFIEA  +IR NLP+A  SGGVSN+SFSFRGN PVREA+HSVFL+HAIKAG+ MGIV
Sbjct: 541  YAVDFIEACAYIRDNLPYALTSGGVSNVSFSFRGNNPVREAIHSVFLFHAIKAGLTMGIV 600

Query: 601  NAGQMIVYDDIDPELRQVCEDVILNRDPGASERLLALADKYRGQGKQQKEQDLAWRSWPV 660
            NAGQ+ +YD+I  ELR   EDV+LNR    +E LL LADKY+G G  ++ +   WRS PV
Sbjct: 601  NAGQLEIYDEIPKELRDAVEDVVLNRSANGTEGLLELADKYKGDGSVKEAETEEWRSLPV 660

Query: 661  EQRLSHALVHGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVV 720
            ++RL HALV GIT FI  DTEE R + +RP+ VIEGPLM+GMNVVGDLFG GKMFLPQVV
Sbjct: 661  DKRLEHALVKGITAFIVEDTEECRQQCKRPIEVIEGPLMSGMNVVGDLFGAGKMFLPQVV 720

Query: 721  KSARVMKQAVAYLMPFMEEEKARNLAAGTDTGERATA-GKIVLATVKGDVHDIGKNIVGI 779
            KSARVMKQAVA+L+PF+E EK          G++  A GKI++ATVKGDVHDIGKNIVG+
Sbjct: 721  KSARVMKQAVAHLIPFIEAEK----------GDKPEAKGKILMATVKGDVHDIGKNIVGV 770

Query: 780  VLQCNNFEVIDLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNI 839
            VL CN ++V+D+GVMVPA KI++TA AE  DI+GLSGLITPSLDEM  +A E+QR GF++
Sbjct: 771  VLGCNGYDVVDMGVMVPAEKILQTAIAEKCDIIGLSGLITPSLDEMVHVAKEMQRQGFSL 830

Query: 840  PLLIGGATTSRVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADY 899
            PL+IGGATTS+ HTAVKIDP Y + +VV+V DASRAVGVA++LLSK+   A+  + R +Y
Sbjct: 831  PLMIGGATTSKAHTAVKIDPQYHNDAVVYVTDASRAVGVATTLLSKELKPAFVEKTREEY 890

Query: 900  AKISAAHHRAQADKKRLTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYID 959
            A I        A  +RL+ A A AN  + DWA+ +PVKPSF G +      L  LAEYID
Sbjct: 891  AMIRERTANRSARTERLSYAQAVANKPQFDWASYTPVKPSFTGRQLLEDIDLRTLAEYID 950

Query: 960  WTPFFQAWELAGRFPAILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPAN- 1018
            WTPFF AW+LAG++P IL+D VVGEAA +L++DA+ ML++++ E    A+A  GFWPAN 
Sbjct: 951  WTPFFIAWDLAGKYPRILEDEVVGEAATALFSDAQAMLNKLIDEKLIRARAVFGFWPANQ 1010

Query: 1019 ADGDDILVYADETRTTPIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVT 1078
               DD+ VY D      +ATLH LRQQ+ K + + N +L+DF+AP  S + DY+GGF+ T
Sbjct: 1011 VQDDDLEVYGDGGE--KLATLHHLRQQIIKPDAKPNLSLADFVAPKDSGITDYVGGFICT 1068

Query: 1079 AGIGEDVIADKFKAERDDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAED 1138
            AGIG + +A  ++ + DDY+SIMVKALADRLAEA AE +H +VR+++WGYA DE LS E+
Sbjct: 1069 AGIGAEELAKAYQDKGDDYNSIMVKALADRLAEACAEWLHQQVRKQYWGYAKDEQLSNEE 1128

Query: 1139 LILEKYQGIRPAPGYPAQPDHTEKATLFELLDAEASAGVTLTESFAMWPGSSVSGLYFSH 1198
            LI E+Y+GIRPAPGYPA PDHTEK TLF+LLDA+  + VTLTE +AM P ++VSG YF+H
Sbjct: 1129 LIREQYKGIRPAPGYPACPDHTEKGTLFQLLDADGISQVTLTEHYAMLPTAAVSGWYFAH 1188

Query: 1199 PQSAYFGVGKIERDQVEDYAARKGWDVATAERWLAPVLNY 1238
            P++ YF VGKI++DQVE Y+ RKG D+A +ERWL P L Y
Sbjct: 1189 PEAQYFAVGKIDKDQVESYSQRKGEDIAVSERWLMPNLGY 1228