Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 1474 bits (3815), Expect = 0.0
 Identities = 742/1232 (60%), Positives = 930/1232 (75%), Gaps = 15/1232 (1%)

Query: 9    RTQLLALAAQRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQPQAI 68
            R QL     QRIL++DG MGTMIQ  +L E  +RG RF D+H DL+GNNDLL+LTQPQ I
Sbjct: 6    RQQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQII 65

Query: 69   EDIHAQYLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAAAKVEAED-G 127
            ++IH+ YL AGADI+ TNTF+ST+IA ADY+M  L+ E++   A+LAR  A +  A+D  
Sbjct: 66   KEIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPS 125

Query: 128  KPRFVAGAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLLETIF 187
            +PR+VAG +GPTNRT SISPDV +PG+R VTFD L  AYSE    L+ GG+D++L+ETIF
Sbjct: 126  RPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIF 185

Query: 188  DTLNAKAALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARPITIG 247
            DTLNAKA  +A+  + E  GI +PVMISGTITD SGR LSGQ  EAF+N++RH RPI+ G
Sbjct: 186  DTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFG 245

Query: 248  FNCALGAKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAEAGLV 307
             NCALG  +LR ++ ++SR+++  V A+PNAGLPN FG+YD S E MA  + E+A+AG +
Sbjct: 246  LNCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFL 305

Query: 308  NIVGGCCGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVGERTN 367
            N+VGGCCGTTP HI AIA+AV   KPR +P +    RLSGLEP  +  +  FVNVGERTN
Sbjct: 306  NLVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTN 365

Query: 368  VTGSAKFRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLVAAEP 427
            VTGSA+F++LI    Y  AL VAR+QVENGAQIID+NMDEG+LD+EA M+ FLNL A+EP
Sbjct: 366  VTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEP 425

Query: 428  DIAKVPVMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAVVVMA 487
            +I+KVPVMVDSSK+ VIEAGLKC+QGK +VNSISLKEG++KF+ +A++ RR+GAAV+VMA
Sbjct: 426  EISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMA 485

Query: 488  FDETGQADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGVDFIE 547
            FDE GQADT  RK EIC RAY ILV+ VGFPPEDIIFDPNIFA+ATG++EHNNY +DFI 
Sbjct: 486  FDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFIN 545

Query: 548  ATRWIRQNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAGQMIV 607
            A   I++ LPHA ISGGVSN+SFSFRGN  VREA+H+VFLYH  K GMDMGIVNAGQ+ +
Sbjct: 546  AVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEI 605

Query: 608  YDDIDPELRQVCEDVILNRDPGASERLLALADKYR--GQGKQQKEQDLAWRSWPVEQRLS 665
            YD++  +LR+  EDVILNR    +ERLL +A+ YR    GK++    L WR+WPV +RL 
Sbjct: 606  YDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLE 665

Query: 666  HALVHGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVKSARV 725
            HALV GITEFI  DTEEAR +A +PL VIEGPLM GMNVVGDLFG+GKMFLPQVVKSARV
Sbjct: 666  HALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARV 725

Query: 726  MKQAVAYLMPFMEEEKARNLAAGTDTGERATAGKIVLATVKGDVHDIGKNIVGIVLQCNN 785
            MKQAVAYL PF+  +K+ +           + GKI+LATVKGDVHDIGKNIVG+VLQCNN
Sbjct: 726  MKQAVAYLEPFINAQKSGS----------TSNGKILLATVKGDVHDIGKNIVGVVLQCNN 775

Query: 786  FEVIDLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPLLIGG 845
            FE+IDLGVMVP  +I++ A+ +N DI+GLSGLITPSLDEM  +A E++R GF +PLLIGG
Sbjct: 776  FEIIDLGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGG 835

Query: 846  ATTSRVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADYAKISAA 905
            ATTS+ HTAVKI+  Y    VV+VN+ASRAVGV +SLLS ++   +   +  DY +    
Sbjct: 836  ATTSKAHTAVKIEQNY-HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQ 894

Query: 906  HHRAQADKKRLTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYIDWTPFFQ 965
            H R     + +TL  ARAN   +DWA  +P  P+  G   F   +LA L  YIDWTPFF 
Sbjct: 895  HARKTPKSRPVTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFM 954

Query: 966  AWELAGRFPAILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPANADGDDIL 1025
             W L G++PAIL+   VGE A+ L+ DA  +LD++  E    A      +PA + GDDI 
Sbjct: 955  TWSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDDIE 1014

Query: 1026 VYADETRTTPIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVTAGIGEDV 1085
            VY+DE+RT     L+ LRQQ +K +G AN  LSD++AP  S   D+IG F VT GIGE  
Sbjct: 1015 VYSDESRTQVAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERA 1073

Query: 1086 IADKFKAERDDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAEDLILEKYQ 1145
            +AD +KA+ DDY++IM++A+ADRLAEAFAE +H +VR+E WGYA+DENLS +DLI E+YQ
Sbjct: 1074 LADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQ 1133

Query: 1146 GIRPAPGYPAQPDHTEKATLFELLDAEASAGVTLTESFAMWPGSSVSGLYFSHPQSAYFG 1205
            GIRPAPGYPA P+HTEKATL+++L+ E + G++LT S+AMWPG+SVSG YFSHP S YF 
Sbjct: 1134 GIRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFA 1193

Query: 1206 VGKIERDQVEDYAARKGWDVATAERWLAPVLN 1237
            V +I+ DQ+  YA RKGW +  AE+WLAP L+
Sbjct: 1194 VAQIQPDQLHSYAERKGWRLEEAEKWLAPNLD 1225