Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1257 a.a., B12-dependent methionine synthase from Sinorhizobium meliloti 1021

 Score = 1761 bits (4561), Expect = 0.0
 Identities = 886/1239 (71%), Positives = 1013/1239 (81%), Gaps = 5/1239 (0%)

Query: 11   QLLALAAQRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQPQAIED 70
            QL   AA+RIL++DGAMGT IQQL   E  FRGERF       +GNNDLL LTQP+AIED
Sbjct: 23   QLAQAAAERILIMDGAMGTEIQQLGFVEDHFRGERFGGCACHQQGNNDLLTLTQPKAIED 82

Query: 71   IHAQYLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAAAKVEAEDGKPR 130
            IH  Y  AGADI+ TNTFSST IAQADY M ++ Y+++RDGARLAR AA + EAEDG+ R
Sbjct: 83   IHYHYAIAGADILETNTFSSTRIAQADYGMEDMVYDLNRDGARLARRAAKRAEAEDGRRR 142

Query: 131  FVAGAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLLETIFDTL 190
            FVAGA+GPTNRTASISPDV NPGYRAV+FDDLR+AY+EQ+ GL+DGGADI+L+ETIFDTL
Sbjct: 143  FVAGALGPTNRTASISPDVNNPGYRAVSFDDLRLAYAEQVRGLIDGGADIILIETIFDTL 202

Query: 191  NAKAALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARPITIGFNC 250
            NAKAA++A  E+   +G+ +PVMISGTITD SGR LSGQ P AFW SVRHA P TIG NC
Sbjct: 203  NAKAAIFATQEVFAEKGVRLPVMISGTITDLSGRTLSGQTPTAFWYSVRHADPFTIGLNC 262

Query: 251  ALGAKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAEAGLVNIV 310
            ALGA  +RAHI ++S VADTLVCAYPNAGLPNEFG+YDESPE MA+ V  FA  GLVNIV
Sbjct: 263  ALGANAMRAHIDELSAVADTLVCAYPNAGLPNEFGRYDESPEQMAAQVEGFARDGLVNIV 322

Query: 311  GGCCGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVGERTNVTG 370
            GGCCG+TPAHI+AIAEAVA + PR +P ID R+RLSGLEPF LT +IPFVNVGERTNVTG
Sbjct: 323  GGCCGSTPAHIRAIAEAVAKYPPRRVPEIDRRMRLSGLEPFTLTDEIPFVNVGERTNVTG 382

Query: 371  SAKFRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLVAAEPDIA 430
            SAKFRKLITAGDYAAAL VARDQV NGAQIIDVNMDEGL+DS+  M+ FLNLVA+EPDIA
Sbjct: 383  SAKFRKLITAGDYAAALDVARDQVANGAQIIDVNMDEGLIDSKQVMVEFLNLVASEPDIA 442

Query: 431  KVPVMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAVVVMAFDE 490
            +VPVM+DSSK+ VIEAGLKC+QGK +VNSISLKEGE  FLH AR+ R +GAAVVVMAFDE
Sbjct: 443  RVPVMIDSSKWEVIEAGLKCVQGKALVNSISLKEGEAAFLHHARLVRAYGAAVVVMAFDE 502

Query: 491  TGQADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGVDFIEATR 550
             GQADT  RK EIC RAY +L   VGFPPEDIIFDPNIFA+ATG+EEHNNYGVDFIEAT 
Sbjct: 503  KGQADTKTRKVEICRRAYRLLTEEVGFPPEDIIFDPNIFAVATGIEEHNNYGVDFIEATH 562

Query: 551  WIRQNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAGQMIVYDD 610
             I   LPH H+SGGVSNLSFSFRGNEPVREAMH++FLYHAI+AGMDMGIVNAGQ+ VYD 
Sbjct: 563  EIIAALPHVHVSGGVSNLSFSFRGNEPVREAMHAIFLYHAIQAGMDMGIVNAGQLAVYDA 622

Query: 611  IDPELRQVCEDVILNRDPGASERLLALADKYRGQ-GKQQKEQDLAWRSWPVEQRLSHALV 669
            IDPELR+ CEDV+LNR   ++ERLL +A++YRG+ G Q KE+DLAWR WPVE+RL HALV
Sbjct: 623  IDPELRETCEDVVLNRRADSTERLLEIAERYRGKGGSQGKEKDLAWREWPVEKRLEHALV 682

Query: 670  HGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVKSARVMKQA 729
            +GITEFIE DTEEAR  AERPLHVIEGPLMAGMNVVGDLFG GKMFLPQVVKSARVMKQA
Sbjct: 683  NGITEFIEADTEEARLAAERPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVVKSARVMKQA 742

Query: 730  VAYLMPFMEEEKARNLAAGTDTGERATAGKIVLATVKGDVHDIGKNIVGIVLQCNNFEVI 789
            VA L+P MEEEK  N   G +   R +AGKI++ATVKGDVHDIGKNIVG+VL CNN+E+I
Sbjct: 743  VAVLLPHMEEEKRAN--GGGEA--RESAGKILMATVKGDVHDIGKNIVGVVLACNNYEII 798

Query: 790  DLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPLLIGGATTS 849
            DLGVMVP+AKI+E A+ +  DIVGLSGLITPSLDEM+ +A EL+R GF++PLLIGGATTS
Sbjct: 799  DLGVMVPSAKILEVAREQKVDIVGLSGLITPSLDEMAHVASELEREGFDVPLLIGGATTS 858

Query: 850  RVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADYAKISAAHHRA 909
            RVHTAVKI+P Y  G  V+V DASRAVGV SSLLS +   +Y   VRA+Y K++ AH R 
Sbjct: 859  RVHTAVKINPRYSLGQTVYVTDASRAVGVVSSLLSPEVRDSYKKTVRAEYLKVADAHARN 918

Query: 910  QADKKRLTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYIDWTPFFQAWEL 969
            +A+K+RL L+ ARANA +IDW A  P  PSF+GTR F G+ LAELA YIDWTPFFQ WEL
Sbjct: 919  EAEKRRLPLSQARANAFRIDWDAHQPKVPSFLGTRVFEGWDLAELARYIDWTPFFQTWEL 978

Query: 970  AGRFPAILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPANADGDDILVYAD 1029
             G FP ILDD   G AAR L+ DA+ M+++IV E WF  KA IGFWPA + GDD+ ++AD
Sbjct: 979  KGVFPKILDDERQGAAARQLFEDAQAMVEKIVAEAWFAPKAVIGFWPAASMGDDVRLFAD 1038

Query: 1030 ETRTTPIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVTAGIGEDVIADK 1089
            E R   +AT  TLRQQ+ KR+GR N AL+DF+AP AS   DY+GGFVVTAGI E  IA++
Sbjct: 1039 EVREAELATFFTLRQQMVKRDGRPNVALADFVAPAASGKRDYVGGFVVTAGIEEVAIAER 1098

Query: 1090 FKAERDDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAEDLILEKYQGIRP 1149
            F+   DDYSSIMVKALADR AEAFAERMH  VR+E WGYA DE  + ++LI E Y GIRP
Sbjct: 1099 FERANDDYSSIMVKALADRFAEAFAERMHEYVRKELWGYAPDEAFTPQELIAEPYAGIRP 1158

Query: 1150 APGYPAQPDHTEKATLFELLDAEASAGVTLTESFAMWPGSSVSGLYFSHPQSAYFGVGKI 1209
            APGYPAQPDHTEK TLF LLDAEA+ GV LTES+AMWPGSSVSGLY  HP S YFGV KI
Sbjct: 1159 APGYPAQPDHTEKETLFRLLDAEAAIGVRLTESYAMWPGSSVSGLYVGHPDSYYFGVAKI 1218

Query: 1210 ERDQVEDYAARKGWDVATAERWLAPVLNYIPSRSTGATD 1248
            ERDQVEDYA RK   V   ERWL+P+LNY+P   T A +
Sbjct: 1219 ERDQVEDYADRKRMSVREVERWLSPILNYVPMPETEAAE 1257