Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 915 a.a., 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  984 bits (2544), Expect = 0.0
 Identities = 501/890 (56%), Positives = 647/890 (72%), Gaps = 15/890 (1%)

Query: 15  LAAQRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQPQAIEDIHAQ 74
           + ++RIL+LDGAMGTMIQQ  L E  FRGERF      L+GNNDLL LT+P  I+DIH +
Sbjct: 8   IVSERILILDGAMGTMIQQYNLKEEDFRGERFAHIPGQLKGNNDLLCLTRPDVIQDIHRK 67

Query: 75  YLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAAAKVEAED-GKPRFVA 133
           YL AGADI+ TNTFSST+++ ADY + E   E++    RLAR  A +  A+   KPRFVA
Sbjct: 68  YLEAGADIIETNTFSSTTVSMADYHVEEYVREINLAATRLARELADEYTAKSPDKPRFVA 127

Query: 134 GAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLLETIFDTLNAK 193
           G++GPTN+T S+SPDV NP +RA+++D+L  +Y +Q+  +L+GG D +L+ETIFDTLNAK
Sbjct: 128 GSVGPTNKTCSMSPDVNNPAFRALSYDELAASYQQQMEAMLEGGVDAILIETIFDTLNAK 187

Query: 194 AALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARPITIGFNCALG 253
           AA++A  +  +  GI+VPVM+S T++D  GR LSGQ  EAF  SV+HA   ++G NC+ G
Sbjct: 188 AAIFAAGQAMKVTGIEVPVMLSVTVSDIGGRTLSGQTLEAFLASVQHANIFSVGLNCSFG 247

Query: 254 AKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAEAGLVNIVGGC 313
           A+ L+  +  ++  A   + AYPNAGLPN  G+YD++P  MA  V E+ + GLVNI+GGC
Sbjct: 248 ARQLKPFLEQLASRAPYYISAYPNAGLPNSLGKYDQTPADMAHEVKEYIQEGLVNIIGGC 307

Query: 314 CGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVGERTNVTGSAK 373
           CGTT A+I      +A  KP V       + LSGLE  E+  +I FVN+GER NV GS K
Sbjct: 308 CGTTDAYIAEYQTLIAGAKPHVPAPKPDCMWLSGLELLEVKPEINFVNIGERCNVAGSRK 367

Query: 374 FRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLVAAEPDIAKVP 433
           F +L+    Y  AL +AR QVE+GA +IDVNMD+GLLD+   M TFLNL+ +EP+IA+VP
Sbjct: 368 FLRLVNEKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVP 427

Query: 434 VMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAVVVMAFDETGQ 493
           VM+DSSK+ VIEAGLKCLQGK +VNSISLKEGE+ FL  ARI +++GAA VVMAFDE GQ
Sbjct: 428 VMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQ 487

Query: 494 ADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGVDFIEATRWIR 553
           ADT ARK E+C RAY +LV++VGF P DIIFDPN+ A+ATG+EEHNNY VDFIEAT WIR
Sbjct: 488 ADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIR 547

Query: 554 QNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAGQMIVYDDIDP 613
           +NLP AH+SGGVSNLSFSFRGN  +REAMH+VFLYHAI+ GMDMGIVN G  ++Y DI  
Sbjct: 548 KNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVNPGTSVLYSDIPA 607

Query: 614 ELRQVCEDVILNRDPGASERLLALADKYR----GQGKQQKEQDLAWRSWPVEQRLSHALV 669
           +  +  EDV+LNR P A+ERL+ LA+  +    G   Q   +  AWR   V++RL +AL+
Sbjct: 608 DTLEKIEDVVLNRRPDAAERLIELAEALKETMGGTSGQAAVKQDAWREESVQERLKYALM 667

Query: 670 HGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVKSARVMKQA 729
            GI +++E D  EA    ++ + VIEGPLM GMN VG+LFG GKMFLPQVVK+AR MK+A
Sbjct: 668 KGIGDYLEQDLAEALPLYDKAVDVIEGPLMDGMNYVGELFGAGKMFLPQVVKTARTMKKA 727

Query: 730 VAYLMPFMEEEKARNLAAGTDTGERATAGKIVLATVKGDVHDIGKNIVGIVLQCNNFEVI 789
           VA L P +E EK             ++AGK++LATVKGDVHDIGKNIV +V+ CN ++++
Sbjct: 728 VAILQPIIESEKVEG---------SSSAGKVLLATVKGDVHDIGKNIVAVVMACNGYDIV 778

Query: 790 DLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPLLIGGATTS 849
           DLGVMVPA  I++ A  E  D++GLSGLITPSL+EM+ +A EL+++G +IPLLIGGATTS
Sbjct: 779 DLGVMVPAETIVQRAIEEKVDMIGLSGLITPSLEEMTHVAAELEKAGLDIPLLIGGATTS 838

Query: 850 RVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADY 899
           ++HTA+KI P Y    VVH+ DAS+   VAS LL+    A    E+ A+Y
Sbjct: 839 KMHTALKIAPVY-HAPVVHLKDASQNASVASRLLNSQMKAELINELDAEY 887