Pairwise Alignments

Query, 666 a.a., phosphomethylpyrimidine synthase ThiC from Rhodopseudomonas palustris CGA009

Subject, 720 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella sp. ANA-3

 Score =  766 bits (1977), Expect = 0.0
 Identities = 406/681 (59%), Positives = 474/681 (69%), Gaps = 58/681 (8%)

Query: 20  PSSKKIYATPASAPDLRVPLREIILSEG-----AGEPN------LPVYDTSGPYTDPTVV 68
           P+S+K+Y    S  DLRV +R+I+ ++      A EP       +PVYD +GPY+DP   
Sbjct: 41  PNSQKLYLQ-GSREDLRVGMRQILQTDTRIGGTAAEPTVEKNPPIPVYDCAGPYSDPAAQ 99

Query: 69  IDVNKGLPRPRTEWVKQRGGVEQYQGRDIKPEDNGNVGAAHAAKAFTAHHQPLRGLDSPP 128
           I+V +GL + R  W+ +R   E                   A   FT       GLD   
Sbjct: 100 INVRQGLAKLRLPWIIERQDTEVLDC---------------ATSDFTQQRLKDDGLDHL- 143

Query: 129 PRGEGSGVGGATPAAFARGADHPPMITQYEFARRGIITKEMIYVAERENLGRKQQLERAE 188
            R E     G++     R A     ++Q  +AR+GIIT EM YVA REN+   +  +   
Sbjct: 144 -RFEA----GSSAIVRPRRALPGKRVSQLHYARQGIITPEMEYVAIRENMALAEVQDEIL 198

Query: 189 AALADGESFGAAVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLTKINANIG 248
                GESFG  +   ITPEFVRDEIARGRAIIP NINH E EPMIIGRNFL K+NANIG
Sbjct: 199 NRRGQGESFGTVIGKSITPEFVRDEIARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIG 258

Query: 249 NSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALE 308
           NSAVTSS+EEEV+K+VW+ RWGADTVMDLSTGR IH TREWI+RNSPVPIGTVPIYQALE
Sbjct: 259 NSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALE 318

Query: 309 KCEGDPVKLTWELYKDTLIEQAEQGVDYFTIHAGVRLQYIHLTASRVTGIVSRGGSIMAK 368
           K  G    LTWE+++DTLIEQAEQGVDYFTIHAGV L+Y+ +TA RVTGIVSRGGSIMAK
Sbjct: 319 KVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAK 378

Query: 369 WCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTK 428
           WCL+HH+E+FLYTHF EIC+L   YDVS SLGDG+RPGSIADAND AQFAELETLGEL K
Sbjct: 379 WCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVK 438

Query: 429 IAWAKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIG 488
           IAW    Q +IEGPGH+PM  IK NMDKQL  C EAPFYTLGP  TDIAPGYDH TSGIG
Sbjct: 439 IAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIG 498

Query: 489 AAMIGWFGCAMLCYVTPKEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALS 548
           AAMI W+GCAMLCYVTPKEHLGLP++ DVK G+I YKIAAHAAD+AKGHP AQ+RD+ALS
Sbjct: 499 AAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALS 558

Query: 549 RARFEFRWQDQFNLGLDPDTAQAFHDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYA 608
           +ARFEFRW+DQ+NLGLDPDTA+A+HDE+LP+++ KVAHFCSMCGPKFCSMKITQDVRDYA
Sbjct: 559 KARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYA 618

Query: 609 AGLG-----------DNEKAALY------PVGHAG--------MTISGTIEDGMAQMSAK 643
           A L            +NE           P G A         +     +   MAQ SA+
Sbjct: 619 ASLAAGALAGASSSQNNETTEALASINSAPQGQASKEAIQQIRVKTQDELAAAMAQKSAE 678

Query: 644 FKEMGSSVYLDAEKVKESNKA 664
           F   G+ +YL       +N A
Sbjct: 679 FAASGAKLYLPLGDANAANTA 699